| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6427 |
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| Symbol | |
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| ID | 8362611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8073521 |
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| End bp | 8076826 |
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| Gene Length | 3306 bp |
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| Protein Length | 1101 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968555 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126032 |
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| Protein GI | 256425379 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTAA CCGGCGTGCT ACTTTTTGTA GCTTTTTTCA CAGCCTATGG GAACGGAGTC
GCACAGCGTG TTACTATTTC CGGCAAAGCC TTCACATTAA GACAGGTATT TACCGTCATC
GAAAAACAAA CAGGGTATGT GGTGCTCACC AACAATGAAT TGTCTTCACA AAGCAAGACC
TTTTCGCTGT CTGCTACTGA CATGCCCCTG AAAACATTTC TCGACAAGCT GTCAGTCGAT
CAGTCCCTGA AATACATTAT ACAGGACAAG ACCATCGTGT TATCCCGCAA TACCTCTCCT
TCGCCAAACA CTGCTACCAT AATGATCCTG GCACCGGAGA AACCTTCGCT TTCCGGTCAG
TTGCTGGATG AGAAAACCAG GGAACCTGTC ATCGGTGTCA CCATCCGTAT GAAGCATTCC
GGTCAGGGGA CTACTTCAGA TGCCTCAGGA CGTTTCTTCC TGCGTGACCT GACAGAAGAT
GCAGTGCTGA TCGTGTCTTC CGTAGGTTAC GCCCCTTCAG AAGTACCTTA TAAAAAGGTA
GCCGCATTAC CGGCAGGAGA TACTTATACT GCGAATGGTA TCAGGATTTT CAAGCTGAAT
ACCGGCGGCA TTGTCATCTA TCTTGCCAGA AGTACCAGCA ACCTTGATGA AAGTGTGGTA
GTAGCATATG GTACCACTAC ACAACGTTTC AATACAGGTA GTGTTGTCAG TGTGAAAGCA
GAAGAGATAG AAAAACAGCC GGTCAGCAAT GTACTGGCAG CATTGGAAGG GCATGTAGCC
GGACTGTTTA TCTCTCAGTC CAACGGCGCT CCCGGTAGCC AGATGAAAAT ATCTATCCGT
GAGCAACAAT CTATCACCAG TGGTAAGCTC CCATTGTTTA TCATCGATGG TGTGCCTTTT
GTAGAAACCC CTATCAACAC TGTTGGCGGT TCTACCTATC AGTCCAATGG CGCCACCGGA
TATATCGACC CGATGAACTC CATCAATCCG GCTGATATCG AAAGCATCTC CGTACTGAAA
GATGGTGACG CGACTGCCAT CTACGGTTCA AGAGGTGCGA ATGGTGTTGT GCTGATCACC
ACTAAAAAAG GCAAAGCAGG TGATACGCGA TTTGATGTGA ATGCGTATAC CGGCGCCGGC
AGAGTGACTA ATATGGTATC TATGATGAAT CTGCAACAGT ATCTGGCGAT GCGTCGTACG
GCCTTTGCTA ACGACAACGT ACAACCAGAT AACTCTAATG CACCTGATCT TACACTTTGG
GATACGAATA AGGAAACAGA TTTTCTGAAA AAATATATTG GCAATACTGC ACATCAGACA
GAGATCACCG GCGCTCTTTC CGGTGGTAGC CCCTATCTGC GGTATCGCTT TTCAAATACC
TGGCGGCATG AATCAACTGT ATTTCCGGGC GACTGGGGCT ACAACCGTTA TGCCTCCCAT
CTCAGTGTAG ATAATACTTC GCGTAACGGT AAGTTTGCCG TTACCGCAAC AGCGTTGTAC
ACCAAAGAAT CTAACAATCA GGTAGCCACT GATCTTACCT CCACAGTTGT CAAACTATCT
CCTAACTATC CGTTGTTTAA CAATGATGGT ACCTTAAACT GGACAGGTGG CTTTACCAAT
CCGGAGTCCT ATCTGATAAA ATCCTCCAGA TTCAAATCGG ATAATCTGCT GGCGAATGCA
GCCTTACGTT ATACAATCAT TCCGGGATTA AATGCAAAGG TCAGTGTAGG TTATAACAAG
ATTTCACAGT CTAACGATAA TTATCAGCCC AGAGCGTCCC TGAACCCCAA CAGTGGTTCA
GGACAATCTA TGGCCTCTTA TTCATCCAAC TACATAGAAA GTTACATCGT AGAGCCGCAG
CTGGACTATA CAAGAGCACT CGGACGCGGC CGTTTGAATG TACTATTAGG TGGCACCTGG
CAGCAATCCA ATTATGCACA GCCTTATTAT GTTACAGCAA CCGGTTTCTC CAATGACAGA
CTGATGAGCT CCTGGGTGGC GGCATCTACG ATCACTTTCA AAAGCAGCAG CTTTACAGAA
TACAAATATG TTTCGGCATT TGGCCGTCTG AACTATGTGC TGAATGATCG TTACCTGTTC
AACTTCACTG GTCGAAGGGA CGGTTCTTCA AGATTCGGTC CGGGACGCCA GTTTGGTAAC
TTTGGTTCCG TTGGCGCAGG TTGGATATTC AGCAGTGAAC CCTGGATGAA AACAGCACTT
CCATGGTTGA GTTATGGTAA AATCAGAGGA AGCTATGGTA CCATTGGTAA CGACCAGATC
AGGGATTACG GCTACCTGTC TACTTATGGT AACGTATTTT ATAACTATGG AGGGCCCGGC
ATTTATCCGG TTCGTAGCGC AAATCCCGAT TACGGATGGG AGTCAAATCG TAAGGTAGAC
ATTGCGCTTG AAACAGGTTT ACTGAAGGAC CATATTCTGT TTACCGCCTC CTGGTTTTCT
AGCCGCACAG GCAATCAGCT GGTGAATATT CCCTTGTCTT CACAGTCCGG TTTCTCATCT
TATACCGGCA ATATGCCTGC GCTGTTACAA AGCTCAGGAT GGGAATTCGA ACTGAAGACC
ACTAATGTCA GTTTGCAAAA ATTCTCCTGG AACAGTTCCT TTAATATCAC TTTTCCGCGC
AACAAACTCC TGTCATTTCC AGGACTGTCC AGTACTGCTT ACGCTTATGT CTTTATCGTC
GGAGAACCCA TCGGCAATGA TAACGGCTAT CATTACACAG GACTACAGGA TGGTATAGCG
ACTGTGGAAG ACCTGAATAA GGATGGCAAA TTCACACAAG GCCTGCACCA GACCATGAAT
GGCGACTATA ACATCATTGC CCGCGCCAGT CCTGACTTTT ATGGCGGATT CAGTAATACG
TTCCGGTATG GGAAGTTCCA GCTGGATGTT TTTATGCAGT TCGCCAAACA GACCAAACCT
GACTTCCGCG GCGCAACAAG AGGGTTCCCT GGCGGACTGG CCAACCAGGA TGCAGATATC
ATTACAGACG GATTTAAGCC AACTGTAACA GTAGGCGGAC CGGCAGCAAA TGCTTATCAG
AATTATTATC TCTATTCTGA TGGGGTATAT TCAAATGCCG CTTTTGTACG ACTGAAAAAT
GTCAATCTCA GTTATGAATT ACCTGCTTCA TGGGCAGCAG CTGCCAGACT GAAATCAGCA
GGCGCTTTTA TCAGGGCGCA GAACCTCTTT ACCATCACCA GTTATTTCGG CTTTGATCCT
GAGACAGGAG GTAGCGTATT GCCACCGCTG AAACAGATAG CAGCCGGTAT TCATTGCTCA
CTTTAA
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| Protein sequence | MRLTGVLLFV AFFTAYGNGV AQRVTISGKA FTLRQVFTVI EKQTGYVVLT NNELSSQSKT
FSLSATDMPL KTFLDKLSVD QSLKYIIQDK TIVLSRNTSP SPNTATIMIL APEKPSLSGQ
LLDEKTREPV IGVTIRMKHS GQGTTSDASG RFFLRDLTED AVLIVSSVGY APSEVPYKKV
AALPAGDTYT ANGIRIFKLN TGGIVIYLAR STSNLDESVV VAYGTTTQRF NTGSVVSVKA
EEIEKQPVSN VLAALEGHVA GLFISQSNGA PGSQMKISIR EQQSITSGKL PLFIIDGVPF
VETPINTVGG STYQSNGATG YIDPMNSINP ADIESISVLK DGDATAIYGS RGANGVVLIT
TKKGKAGDTR FDVNAYTGAG RVTNMVSMMN LQQYLAMRRT AFANDNVQPD NSNAPDLTLW
DTNKETDFLK KYIGNTAHQT EITGALSGGS PYLRYRFSNT WRHESTVFPG DWGYNRYASH
LSVDNTSRNG KFAVTATALY TKESNNQVAT DLTSTVVKLS PNYPLFNNDG TLNWTGGFTN
PESYLIKSSR FKSDNLLANA ALRYTIIPGL NAKVSVGYNK ISQSNDNYQP RASLNPNSGS
GQSMASYSSN YIESYIVEPQ LDYTRALGRG RLNVLLGGTW QQSNYAQPYY VTATGFSNDR
LMSSWVAAST ITFKSSSFTE YKYVSAFGRL NYVLNDRYLF NFTGRRDGSS RFGPGRQFGN
FGSVGAGWIF SSEPWMKTAL PWLSYGKIRG SYGTIGNDQI RDYGYLSTYG NVFYNYGGPG
IYPVRSANPD YGWESNRKVD IALETGLLKD HILFTASWFS SRTGNQLVNI PLSSQSGFSS
YTGNMPALLQ SSGWEFELKT TNVSLQKFSW NSSFNITFPR NKLLSFPGLS STAYAYVFIV
GEPIGNDNGY HYTGLQDGIA TVEDLNKDGK FTQGLHQTMN GDYNIIARAS PDFYGGFSNT
FRYGKFQLDV FMQFAKQTKP DFRGATRGFP GGLANQDADI ITDGFKPTVT VGGPAANAYQ
NYYLYSDGVY SNAAFVRLKN VNLSYELPAS WAAAARLKSA GAFIRAQNLF TITSYFGFDP
ETGGSVLPPL KQIAAGIHCS L
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