Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6407 |
Symbol | |
ID | 8362591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8049798 |
End bp | 8050865 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644968535 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003126012 |
Protein GI | 256425359 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TACCTGTCAG AAGCCTTGTA CGCGTGAGCC TGATCGCACC TTTATGTATT GCCATTCTGG TGGGGCTAAC TTCGTCTGCC AAAGAATATG CCCTGAATAC AGTCCTGTTG AAGTCTGCGT TGATGTACAT CGTGATTTTT TTCATGGGGA TGTACAATTT AGGGCTTATG TTATTGTTGG CTCCCCGATT ACAATATGGT TCCCGCAACT ACAAGATAAT CAGAATCATC CTGAGTTTCA CAGGAGCCGC GTTATTTAAT TATTTGTTAT TCAGGGGAAT ATTGTATTCG AGTCTGCATA CCTACCTGAT ACCGGACTGG TATGATCAGG TCAGAAATAA GATGATCTGG CCGATGTTGT TCCTGCTGCA TGGTCTGGTG GTGAATGTCC TGGTGTTTAT TCTTCATAAT TATATCACCC TGTTACATGC GAAAAACCAT ACGGAGCTGG AAAATGCCCG GCTGAAATTT GCGAATACGG AGGCTATTAA CCAGTTATTA CGGCAGCAGA TCCATCCGCA TTTCCTGTTT AATGCATTGA ATACGTTGAA GTCGCTGATC CGTCGTCACC CGGAAAAGGC GGAAGAATAC CTGATTCATC TGTCTGATTT TCTGAGAGCA AGTATTTCCA AGGGGCAGCG GGATATTATT TCATTGAAAG ATGAACTGAA ATTGAGCTCC GATTACCTGG AAATGCAGAA GATGCGGGTG GGAGAGGCGT TGCGGTTTGA GATAAGCGTA GATCAGCAGT CATTATCGAA CAAATGGTTA CCGGCGTTTT CGCTGCAGCC TTTACTGGAG AATGCGATCA AACATAATGT ACTGACGGTG GAAGATCCGC TTTATCTTGC TGTGATACAG GAGGGGGAAT ATCTGAAAGT GGTGAATAAT TTACAGATCA AACATCAGAC GGAGGTATCT ACCGGCAGTG GACTGATGAA TCTTACAGAA CGTTACCGGA TGTTGACCGG AGAGGATATC CTGATTGAGG ATGACGGGAA AACATTCACC GTAAAAATTA AAATTTTGCA ACATGCAGGT AGTCATCATA GAGGATGA
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Protein sequence | MKNIPVRSLV RVSLIAPLCI AILVGLTSSA KEYALNTVLL KSALMYIVIF FMGMYNLGLM LLLAPRLQYG SRNYKIIRII LSFTGAALFN YLLFRGILYS SLHTYLIPDW YDQVRNKMIW PMLFLLHGLV VNVLVFILHN YITLLHAKNH TELENARLKF ANTEAINQLL RQQIHPHFLF NALNTLKSLI RRHPEKAEEY LIHLSDFLRA SISKGQRDII SLKDELKLSS DYLEMQKMRV GEALRFEISV DQQSLSNKWL PAFSLQPLLE NAIKHNVLTV EDPLYLAVIQ EGEYLKVVNN LQIKHQTEVS TGSGLMNLTE RYRMLTGEDI LIEDDGKTFT VKIKILQHAG SHHRG
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