Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6343 |
Symbol | |
ID | 8362527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7978133 |
End bp | 7978768 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968472 |
Product | resolvase domain protein |
Protein accession | YP_003125949 |
Protein GI | 256425296 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCGC AGCAAGGCGA TGTATGCTTG CTTCGGCGCG TCATTGACTT TTTTGTAGCG CGTGAATTTT TCGAAGTAGA TAGCGGAAAG AATGATAAGC GCCCTATCCT CAAAAGCGCC TTACGTTACT GCAAGAAAAT AGGCGCTATT TTGATTATAG CCAAGATAGA CCGCTTGGCG CGTCATGCCT TTTTCGTGGC GCGACTTCTC GAAAGCCCTG TAAAAATTAT TGCCGCTGAT AAGCCCAACG CAACTAAACT TCAATTGTTA GAAGACGCGA TTGAGGCCGA AAAAGAAGGT GACATTATCA GCAAGCGCAC AAGCTCTGCA ATGCAAGCGG CCAAACGGCG TGGTATTCGG TTTGGTGTAG CGTGTAAGGA CCTCGCGCAA AAGAATAAAC AGGCGGCAGA TGATTTCGCC AAAAAAATGA TACCGATCAT AGAAGAGCTA ATTGCGCAGG GATTTAAAAC AATTCGCGCC CTGGCTGCCG AATTAAACCG TCGTCATATT CATACATTCC GCCGCCATCG TGCAAAGTGG CACCGAAATA CTGTGTATAA CCTTCTGAAC AGGATCAAGG AACTCTCAAT CAATGACGAT ACCCCATCTT TCACCGAAAC ATCTAATTCG TGTTAA
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Protein sequence | MQAQQGDVCL LRRVIDFFVA REFFEVDSGK NDKRPILKSA LRYCKKIGAI LIIAKIDRLA RHAFFVARLL ESPVKIIAAD KPNATKLQLL EDAIEAEKEG DIISKRTSSA MQAAKRRGIR FGVACKDLAQ KNKQAADDFA KKMIPIIEEL IAQGFKTIRA LAAELNRRHI HTFRRHRAKW HRNTVYNLLN RIKELSINDD TPSFTETSNS C
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