| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6242 |
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| Symbol | |
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| ID | 8362424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7867065 |
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| End bp | 7868513 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968370 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_003125849 |
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| Protein GI | 256425196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.679058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCAAAT TCTATGTCGT GGCACACGAA TGTATATCGG TTTTTGATAT TTTTAAGATA
GGCGTAGGTC CTTCCAGCTC ACACACGTTA GGCCCATGGC GGGCGGCCCT GCAGTTCCTG
CAAGAAATTC AGGCTACAGG ACGAAAACTC AATTCCATTG AACACGTCAG CGTTTTGTTA
TATGGCTCAT TAGCCAAGAC TGGTCATGGC CACGGTACGG ATATCGCGGT GCAGCTAGGT
CTTTGTGGTG ATGACCCTGT TACATTTGAT GTGAATCAGA TTAACAGCAA AATGGATGAT
ATCCGCCGAA ATAAGGAAAT GATGCTCGGC GGTACGCACC GTATTGCATT TGACCCCTTA
CAGGATATCT CTTTCCTGTT CGAAGAATCA CTGCCTTTCC ATCCCAATGC ACTGACTTTC
CTGGTCACTT TTGCAGACGG AGAGCAACAG GCTGCTACCT ATTATTCTAT CGGTGGCGGA
TTTGTCGTAA AGGAAGGGGA AGCATCCGGT AGTGGCACAC AGGTAGACCT GCCCTTCCCG
ATAGATACCG CCCGTCAGTT ACTGCAATGG TGTATCAAAA CAGGGTATTC CATCTCTGAA
CTGGTGATGG AAAATGAACA GGCATGGAGA CCGGAAGCAG CCACCAAAGC TGGTGTTATG
AATATCTGGC GGGTGATGAA GGAATGTATC TACCGTGGTT CGCATACAGC AGGTGAACTG
CCCGGCGGAC TCCGGGTAGC CAGACGTGCA GCCGCGCTGA ACAAGAAATT ATTAAAAGGA
CGTGCTTATA ACGATTACGA CTCCTGGATT GCCGCGATCA GGGAGGGTGG TAACCACTTC
GCTTATACGC TGGACTGGGT AAGTTGTTTC GCATTGGCGG TCAATGAGGA AAATGCCTCT
TTCGGCCGCG TCGTAACTGC GCCTACCAAT GGCGCCGCCG GTGTAATTCC TGCAGTATTG
CAATACTTTA TTGCCTTCTG CGATGGCTAC CAGGACGAGA AGATCATGCA GTTTATACTC
ACCGCTTCCG AAATCGGCAG CATCTTCAAA AAACGTTCTA CCATCTCCGC AGCCATGGGT
GGTTGCCAGG CAGAGATCGG CGTATCTTCC GCCATGGCGG CAGCCGCACT CACCGAATGT
CTCGGCGGTT CTCAGCGCCA GGTGCTCATG GCAGCAGAAA TAGCGATGGA ACATCACCTG
GGACTGACCT GTGATCCTAT CGGCGGACTC GTACAGGTAC CCTGCATTGA AAGAAATACC
ATGGGGGCTA TCAAGGCGAT CACCGCTTCA CAGCTGGCTT TGCAGAGCAA CCCCGAACTG
GCGAAAGTAT CACTCGATGC AGTCGTGAAA ACCATGTGGG ATACCGCATT GGATATGAAT
AGTAAATACA AGGAAACTTC TGACGGCGGA TTGGCCGTAA ATATACCTAT CAGCCTTCCG
GAATGCTGA
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| Protein sequence | MFKFYVVAHE CISVFDIFKI GVGPSSSHTL GPWRAALQFL QEIQATGRKL NSIEHVSVLL
YGSLAKTGHG HGTDIAVQLG LCGDDPVTFD VNQINSKMDD IRRNKEMMLG GTHRIAFDPL
QDISFLFEES LPFHPNALTF LVTFADGEQQ AATYYSIGGG FVVKEGEASG SGTQVDLPFP
IDTARQLLQW CIKTGYSISE LVMENEQAWR PEAATKAGVM NIWRVMKECI YRGSHTAGEL
PGGLRVARRA AALNKKLLKG RAYNDYDSWI AAIREGGNHF AYTLDWVSCF ALAVNEENAS
FGRVVTAPTN GAAGVIPAVL QYFIAFCDGY QDEKIMQFIL TASEIGSIFK KRSTISAAMG
GCQAEIGVSS AMAAAALTEC LGGSQRQVLM AAEIAMEHHL GLTCDPIGGL VQVPCIERNT
MGAIKAITAS QLALQSNPEL AKVSLDAVVK TMWDTALDMN SKYKETSDGG LAVNIPISLP
EC
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