| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6217 |
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| Symbol | |
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| ID | 8362399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7839611 |
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| End bp | 7842073 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644968345 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003125824 |
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| Protein GI | 256425171 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA CCACTACATT GTTGGCCTCT TTTTTAACTA TCTGTAGCAT AAATACCATT
CAGGCACAGC AGATTGAAAC AGCCCGGGTT ACTGGCCGGG TATTACAAAC AGGTGCAAAG
CCTGTGGAAT TTGCCACTAT TACTTTACTG AAAGCAAAAG ATTCTTCCCT GGTAAAAGGT
GCTATTGCAG ACATCAATGG CCAGTACGAA TTTGAACAGA TAAAACAAGG TAAGTACCTG
ATTGCCGCTG CTTACGTAGG CATGACGAAA GCTTACAGCA AACCTTTTGA AGTAAAAGGC
AGCGCACCGG TATCTATGGA AACACTGACA CTGGGTGCAG ACGCCAAGAA TCTGAAAGAA
GTAAATGTCA CTGCCAAGAA ACCTTTTATT GAGCAGCGGG CTGATAAAAT GATTGTAAAT
GTTGAAAACA GCATCATCGG CGCTGGTGGT ACCGCTATGG AAGCACTGGA AAAGTCGCCT
GGTGTATCTA TCGACAAAGA CGATAATATT AGTTTAAAAG GTAAAAGTGG CGTTGTTATC
ATGATTGATG GCAAGCTTAC AAATATGAGT TCCCAGGACG TTGCGCAGCT GCTTAAAAGC
ATGCCCAGTA GCAATATTGA GCAAATCGAA CTGATCACCA ATCCTTCCGC CAAATACGAC
GCAGCTGGCA ACTCCGGGAT CATCAACATT AAGCTGAAAA AGAATAAAAT GGTGGGGTCC
AACGGTAACG TATCACTGTT TGGAGCTTAT GGTCTGACAC CCAAATATGG TGGTGCGCTG
AACCTGAACC ATCGTAATGA AAAGTTCAAC CTCTTCGGAT CTTACAACTA CAATCACCGT
GAAAACCAGC AGCACCTTGG TTTATACCGT ACCGGTACTA CTGAAGGAAG ACCTACTGTA
TTCGATCAGG ACAATGAACG GAAAAGGAAA TCGGATTATC ACGGTGTGAA AGTGGGGATG
GACTACTTCA TCAACAAGAA TAATACAATC GGTGTCATGG TAGATGCAGG ATTCAGAAGC
AATACAGAAC CTGCGGATGC GCTTACTAAG ATCGGCGACG GACAGCGTGT GGATTCTACC
CTGAAAACAC ATACCAATGC AGACGGTACC TGGAGAAGAT GGGCATACAA TGTGAATTAT
AAAGCCATCC TGGATACAAC GGGTAAAGAA CTGAATATCG ACCTGGACTA TGCCCGTAAC
AGTGAAGAAC GTGGTAACGA TATCTTCTCT ACTATCTGGG ATTCTGCCGG TAAAAATTAT
ATGCGTGGCG ATACCTCCCG TAACAGTCAG CCAAACAGCA TCGACATCAA AACCATTAAG
GCTGATTACG TACATCCGCT GCGTAACCAG GCCAAGCTGG AAGCCGGTTT CAAACTGAGT
TTCGTAAAGA CTGACAATGA CGCAAAATTT GATTCACTGC GTAGTGGCAA CTGGGTATAT
GATAAGAACC GTTCCAACCA CTTTATCTAT AAAGAGAATG TGAACGCTGC TTATGTCAAT
TTCCAGAAAC AGTTTAAAAA GGTGAATGTA CAGTTAGGGC TGCGTGCTGA GCAGAGCAAT
ATAGAAGGTA ATTCTATCAC AATGAACCAG GTGACGGATA CCAGTTATTT CAATCTGTTT
CCAAGTATAT TCGTAAGCTA TGACATACAT AAGGATCATC AGCTGGGATT GTCTTACAGC
CGCCGTTTAC AGCGTCCTGA CTACGAAGAC CTGAATCCGT TTCAGATCTA TCTGGACAGA
TATACACTGA TCTCAGGTAA CCCTTATCTG AAACCATCTT ATGCAAACAG TGTTGAGTTC
ACGCATACAT TCAAACATTT CCTGACTACC TCTGTCGGTT ATACGCATAC AAAAGACAAG
ATCACACAGA TCGTGGAAGC TGACAAGGAT GTAGTATCCG GAGATACATT GAATATCCGT
TACAAATACC TGAACGTAGC AAAATCTGAT ATCGTCAATC TGAATATCTC TTTCCCGATC
ACGATCACAA AATGGTGGAG CAGCTTTACT TATCTGTCTG CTTACTACAA CAAGTTCCAG
ACGATTGTGG ATAACCAGTC AGTGAATATT TCCAGTGGTG GATTCATGGG ACGTACGCAA
CAGACGTTTA CTTTACCGAA AGACCTGAGT GCTGAAGTAA GCGTATTCTA TCTGTCTCCG
CAGATCGCTG ATGAAGGACT GTTCAGAATG AAACATATGT GCGCCGTTGA TCTGGGTGTA
TCCAAACAGA TCCTGCACAA AAAGGGAAGT CTGAAACTGA ATGTAAATGA TGTATTCAAT
ATTCAGCGCT TCCGTGGAAG TTTCGAAAAT GGTGGCCGTT ACACCGGTGT GACCAGCAAA
TGGGAAAGTC GTCAGGTGCG TCTGACCTTT AACTACCGCT TCGGTAACAC CAATATCAAA
GCTGCCCGCA ACCGTAAAAC CGGCCTGGAA GATGAACAGG GTCGTGTGAA AGACGGTAAC
TAA
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| Protein sequence | MKSTTTLLAS FLTICSINTI QAQQIETARV TGRVLQTGAK PVEFATITLL KAKDSSLVKG
AIADINGQYE FEQIKQGKYL IAAAYVGMTK AYSKPFEVKG SAPVSMETLT LGADAKNLKE
VNVTAKKPFI EQRADKMIVN VENSIIGAGG TAMEALEKSP GVSIDKDDNI SLKGKSGVVI
MIDGKLTNMS SQDVAQLLKS MPSSNIEQIE LITNPSAKYD AAGNSGIINI KLKKNKMVGS
NGNVSLFGAY GLTPKYGGAL NLNHRNEKFN LFGSYNYNHR ENQQHLGLYR TGTTEGRPTV
FDQDNERKRK SDYHGVKVGM DYFINKNNTI GVMVDAGFRS NTEPADALTK IGDGQRVDST
LKTHTNADGT WRRWAYNVNY KAILDTTGKE LNIDLDYARN SEERGNDIFS TIWDSAGKNY
MRGDTSRNSQ PNSIDIKTIK ADYVHPLRNQ AKLEAGFKLS FVKTDNDAKF DSLRSGNWVY
DKNRSNHFIY KENVNAAYVN FQKQFKKVNV QLGLRAEQSN IEGNSITMNQ VTDTSYFNLF
PSIFVSYDIH KDHQLGLSYS RRLQRPDYED LNPFQIYLDR YTLISGNPYL KPSYANSVEF
THTFKHFLTT SVGYTHTKDK ITQIVEADKD VVSGDTLNIR YKYLNVAKSD IVNLNISFPI
TITKWWSSFT YLSAYYNKFQ TIVDNQSVNI SSGGFMGRTQ QTFTLPKDLS AEVSVFYLSP
QIADEGLFRM KHMCAVDLGV SKQILHKKGS LKLNVNDVFN IQRFRGSFEN GGRYTGVTSK
WESRQVRLTF NYRFGNTNIK AARNRKTGLE DEQGRVKDGN
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