| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6170 |
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| Symbol | |
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| ID | 8362352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7785284 |
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| End bp | 7787818 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968300 |
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| Product | membrane or secreted protein |
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| Protein accession | YP_003125779 |
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| Protein GI | 256425126 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.433726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0340627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CGACCCTTTT ACTACTAACA CTCCTACTCA CCTGTCAGGC CCTGGCCCAG
CAACCGCTGG TCTATGTGGA CAAAACCGGC GTATTACGTT ATACAAAAGA CCAGAAAGAA
GCTGTTTTCT TCGGCGTGAA TTACACAGCG CCCTTCGCAT ATGGATACCG TTCACACAAA
GCAGTAGCCG CCGATCTGAA AAAGGCAATA GATGATGATG TTTATCACCT TGCCCGCCTG
GGCGTAGATG CTTTCCGTGT GCATGTCTGG GACACAGAAA TCACAGACGC ACAAGGCAAT
CTGCTCACAA ATGACCACCT TGATCTCTTT GACTATCTCA TCAGCAAACT GAAAGAAAGA
AAGATCAAAA TACTGCTGAC GCCTATTGCC TTTTGGGGAA ACGGTTATCC GGAGAAAGAT
GAAAATACCG GCAGTTTCTC TTACCGCTAT GGTAAGGAAA AAGCACTGGT GAATGATACT
GCAATCCGTG CACAGGAGAA TTATGTAAAA CAGTTCTTCG TACATGTCAA CCCTTATACC
GGCTTGACCT ATAAGAACGA TCCTGATATC ATTGCAACAG AGATTAACAA TGAACCGCAT
CACAGCGGGC CACAGGAAGG CGCCACAAAT TATGTCAACA GACTCGCAGT CGCTATCAGA
ACCACCGGCT GGAAAAAACC TGTCTTCTAC AATATCAGTG AGTCGCCTTA CTATGCCGCC
GCCGTTGCAA AAGCCAATAT CGATGGTGTA AGTTTTCAAT GGTACCCGAC AGGACTGGTG
GCTAACCGTA CCTTACAGGG TAACCTGCTG CCGAATGTCG ATCATTACAG CATCCCCTTC
GACACCATTC CGGCCTTTCA CAACAAAGCC AGAATGGTGT ATGAATTTGA CGCGGGAGAT
GTACTGCAAC CTGTCATGTA CCCCGCCATG GCCCGCAGTT TCAGAACTGC CGGCTTTCAA
TGGGCCACAC AATTTGCGTA TGACCCGATG GCGACGGCTT ATGCCAATAC AGAATACCAG
ACACATTACC TCAATATGAT CTATACGCCC GAAAAGGCGA TCAGTCTACT GATAGCGGGC
AAGGTATTTC ATCAGTTGCC GCGTAATAAA AACTATGGTA CCTATCCGGC GGATACCCTC
TTCGGTTCCA CACGACTGAG TTATGCACAA CAACTCAGCG AGTGGAACAC TAAGACGGAG
TTTTATTACA CCAGTCACAC CAACACCGCC CCGCTTAACA GCACCGCACT GGAACATCTT
GCCGGTACCG GTAATTCTTC TGTTGTACAA TACAGCGGCA CAGGCGCGTA TTTCCTCGAC
AAAATAGCAG CAGGTAACTG GCGACTGGAA ATCATGCCCG ACGTCATTCC CCTGAGCGAT
CCTTTTGAAA AAGCATCGCT GGCAAAAGAA GTACGCCGGG TACAATGGAA TAACCAATCC
ATCAGTATCA ACCTGCCCGA CCTGGGCGAA GCATTCAGCA TCACACCAGT CAATACAGGT
AATCATCACC AGCCACAGGT ATCAGGTAAC TCCTGCACAG TATATCCTGG TACTTATCTG
CTGACCAGCA AAGGAACAAC CGCAGCAGCA ACCAACAGTA CTGTCAATGG CATCATCGCT
TTACAGGAAT TTGCCGCTCC GCAACCGGTA CGTACCACAC TGGCAGTCTT CCACCAGCCA
CTGACGGAAA TATCAGCGGA TCAACCGGCA ACTGTCACCG CTACCATTAC GGGTATCGAT
GCCAATGCGA AGGTATGGCT GGAAGGGAAT CGTCTCGGCG GACAGTGGTT CAAAGCTGAT
ATGCATCCAA CAGGTGTAGC TGCTTATTCG GCCACACTCT CTCCCGAAAT ACTGCAACCT
GGATTGCTGC AATACAGACT GGTCATACAA CAAGGCGATC ATTACACCAG CTTCCCCGGC
CAGCATGAAG GTGATCCTCA CGCATGGGAT AACTACCAGC GCGATACCTG GCAGACTTTT
GTCGCAGCGC CTAATACCGC TCTGTCACTA CTCAATGTGA CTGACAACAA AGATCTCATC
ACCATTCCTG CCTACACACA AGATGCTTAT ACGGCAGGCA GTAGCTCCGG TCAACTGGCA
CTCCGCATCG CAGGACAAGG AAAGGGCTCA GATACCATCA CCGGTGTTAG CAGAGCAGTC
GACGTACATA TCAAAGACAG GGCATCCGAA CTGAAAGCCT ATAATACCAT CGTGATCCGT
GCTAGGGTAC AGGGAGTCGC AAATACCCAA GCCCGGATAG CACTGGTCAC GGCTGATGCC
AGCGCTTTTG CGACTACGTT CCCACTCAAA GATGCATACA GCGACATCGA AGTTCCCTTG
CGTAGTTTAT CTGCGGATAA GGCTTTATTA CTGCCAAGGC CTTACCCCGG CTTTATGCCC
TTATGGTTTA AAGCAGCAGC GGACAAGGCT TTCGATATCC CACAGCTCGA CAAAATAGAA
CTCACCAACA TACCCACTGC GGACACCACA CCATATACCA TAGAAGTAGA ATCCGTCTGG
TTAAAAGTTA AATAG
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| Protein sequence | MKKTTLLLLT LLLTCQALAQ QPLVYVDKTG VLRYTKDQKE AVFFGVNYTA PFAYGYRSHK
AVAADLKKAI DDDVYHLARL GVDAFRVHVW DTEITDAQGN LLTNDHLDLF DYLISKLKER
KIKILLTPIA FWGNGYPEKD ENTGSFSYRY GKEKALVNDT AIRAQENYVK QFFVHVNPYT
GLTYKNDPDI IATEINNEPH HSGPQEGATN YVNRLAVAIR TTGWKKPVFY NISESPYYAA
AVAKANIDGV SFQWYPTGLV ANRTLQGNLL PNVDHYSIPF DTIPAFHNKA RMVYEFDAGD
VLQPVMYPAM ARSFRTAGFQ WATQFAYDPM ATAYANTEYQ THYLNMIYTP EKAISLLIAG
KVFHQLPRNK NYGTYPADTL FGSTRLSYAQ QLSEWNTKTE FYYTSHTNTA PLNSTALEHL
AGTGNSSVVQ YSGTGAYFLD KIAAGNWRLE IMPDVIPLSD PFEKASLAKE VRRVQWNNQS
ISINLPDLGE AFSITPVNTG NHHQPQVSGN SCTVYPGTYL LTSKGTTAAA TNSTVNGIIA
LQEFAAPQPV RTTLAVFHQP LTEISADQPA TVTATITGID ANAKVWLEGN RLGGQWFKAD
MHPTGVAAYS ATLSPEILQP GLLQYRLVIQ QGDHYTSFPG QHEGDPHAWD NYQRDTWQTF
VAAPNTALSL LNVTDNKDLI TIPAYTQDAY TAGSSSGQLA LRIAGQGKGS DTITGVSRAV
DVHIKDRASE LKAYNTIVIR ARVQGVANTQ ARIALVTADA SAFATTFPLK DAYSDIEVPL
RSLSADKALL LPRPYPGFMP LWFKAAADKA FDIPQLDKIE LTNIPTADTT PYTIEVESVW
LKVK
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