| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6167 |
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| Symbol | |
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| ID | 8362349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7781245 |
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| End bp | 7782837 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968297 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003125776 |
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| Protein GI | 256425123 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00835127 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTATCA AATCACTATC AATCATAACC GCCTGTGCCG CTATTATGGC GACCACAGCC
TCCTGTACCA AAGACCTGAA CCGGTTGCCT TATGTACAGG AAACATCTGA AACTGTATAT
AAAGATCCTG TAAAGATCAA AGGCGTACTG GCAAAACTAT ATGGCAGTCT TTGTCTCAGC
GGACAACACT ACGAAGACAA CAGTCTTTCC GATATCGTTA CTGACAATAC CGGCACCAAC
GTGTTTCTGC GTAACTACTG GCAATTGCAG GAACTCACTA CTGACGAAGC AGTCATCGGC
TGGAATGACG GCGACCTGCT GAGTTTTCAC AACCTGAACT TTACACCTGA TGGTAAATAT
GTAAAAGTGC TTTACGACCG TATCTTCTTC GGTGTCGCTG CCTGCAATGA ATTCCTGCGG
CAGACCACAG AAGAGAAAAT GAGCAGTTTT CCTGCGGATG TAGCAGCCGA TATACAAGAA
TACCGCAACG AAGCACGCTT CCTGCGTGCC TTCTATTACT GGACAGCGAT CGACATGTAT
GGCAAAGTTC CCTTCGTCAC AGAAGCCGAT CCTGTAGGCG CATTCCAACC AAAACAGATC
TCAAGAGCAG AACTGTTCAC TTACCTGGAA ACAGAATTAA AAGCGCTGGA AACACTCCTG
CCTGAGCCAC GCACCAATGA ATACGGTCGC GTAGACAAAG GCGCTGCCTG GATGCTGCTC
GCCAAACTTT ATCTCAATGC AAAAGTATAT ACCGGCACAG AGAAGAACAG CGAGACAATC
ACTTACTGTA ACAAACTGAT GACGAATAGT CCGTATTCAC TTGCACCAGA CTATTCCCAA
TTATTCAAAA CAGACAACGA TAAAACAACT GAGATCATCT TCCCGATCCT GGCTGATGGT
GTGACTTCAC AGTCTTATGG TAATACCACC TTTATCGTAT TAGGTTCTAT CGGTGGTGCT
ATGAATGTAG CCGACTATGG CGTATCTACC GCCTGGGGCG GTATGCGAAC GACAAGAGCT
ATTGTAGACC TCTTCCCTGA TCCTTTTGGT ACGGTAGATA AACGCGCCAT GTTTTATGCC
ACCGGACAAA ACCTCGACAT CAGCGATATC GCCAGTTTCA ATGACGGCTA TGCAGTGCCG
AAGTTTAAAA ACATCAGCTC TACCGGTCAA CCGGGATCCG ATCCTACCAG GAGATTCACA
GATACCGACT TTCCGATGTT CCGTTTAGGA GATGCTTACC TGATGTATGC AGAAGCAGTG
GTGCGCGGCG GCAGTGGCGG CTCTGTCGCA GAAGCCGTAA ACTATGTCAA CCTGTTACGT
CGCAGAGCAT ACGGCAATAA CAACGGTGAT ATCAGCGCAA CACAACTCAC CCTGGATTTC
ATACTCGCAG AAAGAGGCAG AGAACTGTAT TGGGAAGCAA AAAGAAGGAC TGACCTGGTG
CGCTTTGCCA GACTCACCAG CGGCAGCTAT CTATGGCCTT TCAAAGGAGG TGTTGCCGCA
GGTACGGGTG TACAGGACAA GTACAATGTG TTCCCGATTC CCACGACAGA CAGGATCGCC
AATCCTAACC TTGTCCAGAA TGATGGCTAT TAA
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| Protein sequence | MTIKSLSIIT ACAAIMATTA SCTKDLNRLP YVQETSETVY KDPVKIKGVL AKLYGSLCLS
GQHYEDNSLS DIVTDNTGTN VFLRNYWQLQ ELTTDEAVIG WNDGDLLSFH NLNFTPDGKY
VKVLYDRIFF GVAACNEFLR QTTEEKMSSF PADVAADIQE YRNEARFLRA FYYWTAIDMY
GKVPFVTEAD PVGAFQPKQI SRAELFTYLE TELKALETLL PEPRTNEYGR VDKGAAWMLL
AKLYLNAKVY TGTEKNSETI TYCNKLMTNS PYSLAPDYSQ LFKTDNDKTT EIIFPILADG
VTSQSYGNTT FIVLGSIGGA MNVADYGVST AWGGMRTTRA IVDLFPDPFG TVDKRAMFYA
TGQNLDISDI ASFNDGYAVP KFKNISSTGQ PGSDPTRRFT DTDFPMFRLG DAYLMYAEAV
VRGGSGGSVA EAVNYVNLLR RRAYGNNNGD ISATQLTLDF ILAERGRELY WEAKRRTDLV
RFARLTSGSY LWPFKGGVAA GTGVQDKYNV FPIPTTDRIA NPNLVQNDGY
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