Gene Cpin_6136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6136 
Symbol 
ID8362318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7737644 
End bp7738525 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content49% 
IMG OID644968267 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003125746 
Protein GI256425093 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACA AACAAATCAC AGCCATAGAC CAGGAGGCAA CAGTCCGTTA CAGTGTATAC 
AAAGCTTTTC AGGTAAGCGT ACAACATGCC GTTGCGTACG TATCATTCAA CAACCCACCG
ATGAATGTAC TGGATGCTAC CATGATGCTT GACCTGGCGG CATTCGCCGA AGCCGTGCAG
GCAGATGATA CCTTGAAAGT AATCGTCTTT CAGAGTGCAG ATTCCGACTA CTTCATTGCG
CATGGAGATA TGAACTATAT CGTGGATCCT TCTTCTTTTG CAGGATTAGT AGATCCGGCG
AAGATGGACC CGCTTATCAA TCCGATGCAG CAGCTGCATG AAAAAATCAG CCAGTTGCCA
CAGGCGACCA TTGCCATCAT TGATGGTTTT GTACGCGGCG GCGGACATGA ATTTGCGCAA
GCCTGCGATA TGCGTTTTGC TTCACTGGAA AAAGCGAAGA TCGCACAACC GGAAGCCATG
ATGGGTATTA TCCCCGGTGG TGGTGGTACA CAATATCTTA CCCGCAGAAT CGGAAGAGCC
AGGACATTGG AGCTGGTATT GGGCGCAGAA TTGCTGGACG CTAAAACAGC GGAATTGTAT
GGTGTGGTAA ACCGGGCCTT ACCACAGGAC CAATTATATA CTTATGTAGA GACCCTGGCT
ACCAGGATTG CCGGATTACC TGCTGGCGTA GCCGCTGGCG CAAAAAAAGC CGTGGATGCT
GCTAATGGTG ACCGCTATGA AGGTCTGGCA ACAGAGAATA AGCTATGTAT GGATCTTTTC
CTGAGACCGG AAACCGTCCA ACTGGCCAAA GTAGCATTAG CTGCCGGAGC ACAGACGAGA
GAAGGGGAAA GAGATCTGGA GGGTATTATG AATAGTCTGT AA
 
Protein sequence
MKNKQITAID QEATVRYSVY KAFQVSVQHA VAYVSFNNPP MNVLDATMML DLAAFAEAVQ 
ADDTLKVIVF QSADSDYFIA HGDMNYIVDP SSFAGLVDPA KMDPLINPMQ QLHEKISQLP
QATIAIIDGF VRGGGHEFAQ ACDMRFASLE KAKIAQPEAM MGIIPGGGGT QYLTRRIGRA
RTLELVLGAE LLDAKTAELY GVVNRALPQD QLYTYVETLA TRIAGLPAGV AAGAKKAVDA
ANGDRYEGLA TENKLCMDLF LRPETVQLAK VALAAGAQTR EGERDLEGIM NSL