Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6121 |
Symbol | |
ID | 8362303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7718626 |
End bp | 7719987 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644968252 |
Product | outer membrane efflux protein |
Protein accession | YP_003125731 |
Protein GI | 256425078 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCA AACATACAAA CACAGGATAC AGCTGTTTGT TATTAAGCTG TCTGTCTGCT GCCATCTTAC TGATGCATAT CACAATCGCA AACGGGCAAA CAGCAAATAA CAATACTTAT AAAATCAGCC TTAACGAAGC AGTCGAATTT GCAAAGATCC AGAACAAGCT TGTTCAGGCA GCGAATTTTG AAGAAACTGC CATGAGTGAA GACAAAAAGG ACGTATACAA AGCAGTATTG CCGGATATCC GTGTAAATGG CTCCTATCAA AGATTCAGCG GTCTCACATT GTTCAACGAT GGTCTTCGTC ATGCCAATAC GGAAGCACGA AGGCCCACAT CAACTTCAGC AGCCTTGGGT ATTGAGGCAT TATTCAACAT CTATAGTGGT GGCAAGCAGA AAGCCCTGCA GCGTGAATAT ACCTTCCGTG AAAAGCTGGA ACAGTTAAAT ACAAAAGATC AGTCGGGGAT TATCGCGTAT CAGACTGCCG CCCAATACCT CGAACTAGTC AGACTGAATG AACAGGAAAA GTTCATCCAC GAACAGGTAA AACGGGCAGC TGTAAGAGTA AAAGATATTC ATGCACTTTA CGACAACCAG AAAGTAACCA GGAGTGATGT GCTACGTGCG GAGGTAAACC TATCAAACGT ACGGCTTTCC CTGGAACAGA ATGAAAATGA CATTGCAATC GCCAATCAGA AGCTGGTGGT ACTGATGAAT GTACCGGACG CCATACACAT CATACCACTC GATTCTGCGG GTATGTTAAA GCCCGACATT CATTCGCTGT TACCGATCGC TGATGCTGCG GAAACATCCT CCTATAGTGT ACTAAAAGCC GCTAAAAACG TCGAAATACA AAAGGAAAAG GTAAAAGGTG TTCGGAGTAA TAATAAACCA AATCTGAGCT TCTATTCCGG CTATGGTATC AATTACCCAA ACTATTTATT CTTCCCTCCT GTTGACCAAG CGTATGCGAT TGGCTTCGCA GGATTGAAAG CACAGTATAG TATTTCATCG GTCTATCATA ATAAAAGCAG GATAGCAGCC GCTAAACTCC GGGTTAAAGA ACTCGAACTG CGACAACAGG CATCTGCAGA TAATATACGG TCAGAAGCCA AAGCGTATTA TGCAAAATAT GCAGAAGCAT TATCACGGAT CACGGTTAAT GAGCATTCTG TCCAACAAAC GGAAGTCAAT TACCGGATCG TCAACAATAA GTATTTAAAC CAGTTAGCCT TACTGACTGA TCTGCTGGAT GCAGACAATC TGTACCAGGA ATCACAATTC AACCTGGTGA AAGCACAAAC TGAAGCACTC GTCATTTACT ATCGCCTGCT TTATACCAGT GGCAATTTAT AA
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Protein sequence | MRIKHTNTGY SCLLLSCLSA AILLMHITIA NGQTANNNTY KISLNEAVEF AKIQNKLVQA ANFEETAMSE DKKDVYKAVL PDIRVNGSYQ RFSGLTLFND GLRHANTEAR RPTSTSAALG IEALFNIYSG GKQKALQREY TFREKLEQLN TKDQSGIIAY QTAAQYLELV RLNEQEKFIH EQVKRAAVRV KDIHALYDNQ KVTRSDVLRA EVNLSNVRLS LEQNENDIAI ANQKLVVLMN VPDAIHIIPL DSAGMLKPDI HSLLPIADAA ETSSYSVLKA AKNVEIQKEK VKGVRSNNKP NLSFYSGYGI NYPNYLFFPP VDQAYAIGFA GLKAQYSISS VYHNKSRIAA AKLRVKELEL RQQASADNIR SEAKAYYAKY AEALSRITVN EHSVQQTEVN YRIVNNKYLN QLALLTDLLD ADNLYQESQF NLVKAQTEAL VIYYRLLYTS GNL
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