| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6073 |
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| Symbol | |
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| ID | 8362255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7672770 |
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| End bp | 7674050 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644968207 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003125686 |
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| Protein GI | 256425033 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA ACTTAACCCG GAAAGAATTT ATTACCCAGT CCTCCACACT GACGGGTGGA
CTTCTTCTGA GCACCATTTT GGGGACAACG TTCAGAAGCT GTATTGGTGG ACAGGAAAAT
GGTCCCATCA TAGTCGGCCA CCAGGCAGAT CTTACCGGCG GTATTTCTTC CTGGGGCTAC
TGGATCCATA AGGCTGCGGT TGCAGCAGTT GACGAAATCA ATAAGGTAGG AGGCATCAAT
GACAGACAAC TTAAATTAGT GGTAGAAGAC ACGGAAACCA ACCCGACGGT AGGGCAAAGG
AAATTCAGAA AATTGGTCAA TGACCATCGC GCGGACTTTG TCATAGGATC AGTCCATTCA
GGTGTGATGA TGGCCACCGT TCCGCTCGCC AAAGAATTGA AGACACTATA TATGCCCATT
GCCATGGCAT GTGAGGCAAC ATCAGAAAAA GGTAACCGGT ACATATACCG GATGGAAAGT
GAAGTATGCA CCCAGGCGCA GGCCAGCACT GAATGGATGG TGAAACAACT GGCAAAAAAA
TGGACAATTG TTGTTGCCGA CTATTCATGG GGATGGTCAC ACGAAGAAAT GTTCTCCCAT
GACATTGCCA AAAAGGGTGG AGAGGTACTG GCAAAAATCC GTGTACCTGT AGGCACAAAA
GACTTTTCAC CACACTTGAG TAAAATACCC AAAGACACAG AAGGCATCTA TTTCATTTTC
TTCGGAGCAG ACAGCACCGG CTTTATTCAG CAACTGTATG AACATGGATA CCGCAAACAG
AAATTCACAA TGATATGTAC GCTGGAAGCG ATTGATGTAG CCTCTCTCGG TGCAGCAGTA
GAAGGAATGT ATCTCGTCGA ATATTTCCCC AGACAATTAC AATACGCAGA TAATGCATTT
AATAAAAAAC TCAGATCCCT GGTGAATGTA GACAACGAAG GATATGAGAT CGGCAACCGT
CAACGGGTAC TGGCTGGCTC CCACTACTGG GCATCTTTCC AGCATATCAA CCTGGTGGCA
GAAATAATGA AGAAAATTGA ATATAAGAAC AAAAAAGAGG ATACGAACAG ACTCATTGAA
GCACTGGAAG ACACCACTTC CATTAAACAA TCTTACGCCT ATCCACAAGG CGATATGATA
TTAAGACCAC AGGATCATCA GGGCTTCCAT AAACACTGGA TGTCAAAAGT GGTGAATGGA
AAATTAGAAG TGCAGTTTGC AATTGAGCCA TCGCAGGTGC TGTATAATAC TACAGTAGAT
TTTACAAAAG AAACTTTTTA A
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| Protein sequence | MNKNLTRKEF ITQSSTLTGG LLLSTILGTT FRSCIGGQEN GPIIVGHQAD LTGGISSWGY
WIHKAAVAAV DEINKVGGIN DRQLKLVVED TETNPTVGQR KFRKLVNDHR ADFVIGSVHS
GVMMATVPLA KELKTLYMPI AMACEATSEK GNRYIYRMES EVCTQAQAST EWMVKQLAKK
WTIVVADYSW GWSHEEMFSH DIAKKGGEVL AKIRVPVGTK DFSPHLSKIP KDTEGIYFIF
FGADSTGFIQ QLYEHGYRKQ KFTMICTLEA IDVASLGAAV EGMYLVEYFP RQLQYADNAF
NKKLRSLVNV DNEGYEIGNR QRVLAGSHYW ASFQHINLVA EIMKKIEYKN KKEDTNRLIE
ALEDTTSIKQ SYAYPQGDMI LRPQDHQGFH KHWMSKVVNG KLEVQFAIEP SQVLYNTTVD
FTKETF
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