| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6069 |
|---|
| Symbol | |
|---|
| ID | 8362251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7666942 |
|---|
| End bp | 7668921 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644968203 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_003125682 |
|---|
| Protein GI | 256425029 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTAC CCCGGACCCT CGCCTTGTTA TCACTTTCAT TATTAGCCTG CCGTGATACT
AAAACAGACG TTCCGATCAA TTGTGAGTCT TTTAAACTGT TAATGTCAAC AGCAAACAAC
GAAAAGGAAA AGTTCGCTGT ACGGCTTTCT GCGATCCGGC GGGCATATGC ATTTGCGAAA
CAACAAGGGG ATGTTTCCGG ACAGCTTGAA AGTCTGCGTA CAAGAGGCGT CGTATATCTG
AAAATGGATA GTACAGATGA AGCGTTGTCT ACCTATCGGC AGGTGGTTAC ATTGGCGGCA
AATGCGGGTG ATGAGGAGAA TCAGGGTATG GGGCTTAATA ACATAGGCTC TATTATGATT
GAGAGGTCGG CGTACGACAG TGCGATTATT TATTTTGAGC AGGCAGGTAA ACTATTCAGA
CATATCGGCG ATACTTTGCG TGTCGTTCAG GGTAATGTCA ATACGGGAAT CGCTTATAAG
AATATTGGCG CTTATGAGAA GGCATTCAGT ATTTCCATGG ATGCAGCCGG TATGATGGAG
AAGATGAAAA CCTCAGCAGA CCTGGCCACT GCATATAATA CGCTTGGGAA TACCATGAAG
GATCTGCACC GGCCCGGTGA GTCATTACAG TACCACAACA GGGCAATGAC GATCCGGCGA
GGGCTGAATG ACAGTACGGG TATCGGGAGT TCATTGAACA ATATAGGGAA CGTGTATAAG
GAGACAGGAG AATATGCACG TGCATTGCAA TATTATCTGC AGGCTTTGGA AATAAAGAGG
AAAGCGGGTT CGAAGCGATC GGTGGTCACT ACTATTGATA ATATCGTGGA AGCTTATATT
GGCATGGAAC AATACACCAT GGCCGAACAA TATGAGCAGG AAGCATTAGG TATGCGGGAT
GAAAACAAGG ACAAAGACGG CTGGATGACA TCTGCGAACC GTCTTATCCG CATTTATGTG
GCTCGTCAGG AAACCGCCAA AGCAAAGGAA CTGGCGTTGT ATGTGGCAAA AATTGCGGAT
GCATCTATCT ATGTGAACCA ACGACTGAAA AATACCTTGC TGCTGAAAGA AATCTATTTG
CAGGAGAAAG ATTATGCTAA TGCTTTAATA CAGTCAGGGA TAGCATTGGG TTTAAAAGAT
AGCCTGTTCA ATACTGATAT GTCTACGGCC ATAGCATCCA TGGATGCGCG TTTCAGGGTA
GAAGAAAAAG AGCAGCAATT GGAACTGGCA GGGAAGAATG CTATTATTCA GCAACAGCAG
ATCGGTATGC AGCACAGATT CCTGTTATTA CTGGGGACCA TTATCTTATT ACTGCTGGTG
GTCTCATACC TTTTATTTCT TTCCGGCAAA CTCAGAAAAA AAGCCCGTGA ACGCACAGAG
TTGCTGATGA AAGAACTCAA CCACCGTGTG AAGAATAATC TACAGATCAT TTCAGATATT
ATGAATCTGC AGACTGCTAC AGTAGATTCT CCTAAGGAGC GCGCGCTGAT TGAAGCGGGT
AAAAGTCGTG TACAGTCTAT CAGTATTGTT CATAATCTGC TATACCGGCA GGCTTATACC
GGTAATATCA ATATGCAAGC TTTTATTAGT GAGATAGTAA AGAATGTGGA GCTGGCGTTT
CATGGCCACG GGCGGCAGGC ATCTGTTATA TCAGGTGTGG ATGACATCCT GTTAGATGAA
GATCTGGCGA TTCCCTTAGG GCTTATTACG AATGAATTGC TGACGAATAT CTACAAATAC
AGTCAACCTG CTGTTGCCGG TCATTTATCT ATCCGTGTGC AAATGCGACA AGAAGGGGAG
GGCTACCTTC TGCTTATCAG TGATGACGGG TTGGCCTGGG ATGTGCAGGC TGCCAGGATG
CAAAGCAGCG GACTTGGTTT GTTATTAGTA GATATGCTGG TGAAGCAACT TAAAGCGTCC
TGGCTGTCTT GTCGTGAAAA TGAGATCACT ATTCATCGCA TTCGTTTTAG CAATGTTTAA
|
|---|
| Protein sequence | MSLPRTLALL SLSLLACRDT KTDVPINCES FKLLMSTANN EKEKFAVRLS AIRRAYAFAK
QQGDVSGQLE SLRTRGVVYL KMDSTDEALS TYRQVVTLAA NAGDEENQGM GLNNIGSIMI
ERSAYDSAII YFEQAGKLFR HIGDTLRVVQ GNVNTGIAYK NIGAYEKAFS ISMDAAGMME
KMKTSADLAT AYNTLGNTMK DLHRPGESLQ YHNRAMTIRR GLNDSTGIGS SLNNIGNVYK
ETGEYARALQ YYLQALEIKR KAGSKRSVVT TIDNIVEAYI GMEQYTMAEQ YEQEALGMRD
ENKDKDGWMT SANRLIRIYV ARQETAKAKE LALYVAKIAD ASIYVNQRLK NTLLLKEIYL
QEKDYANALI QSGIALGLKD SLFNTDMSTA IASMDARFRV EEKEQQLELA GKNAIIQQQQ
IGMQHRFLLL LGTIILLLLV VSYLLFLSGK LRKKARERTE LLMKELNHRV KNNLQIISDI
MNLQTATVDS PKERALIEAG KSRVQSISIV HNLLYRQAYT GNINMQAFIS EIVKNVELAF
HGHGRQASVI SGVDDILLDE DLAIPLGLIT NELLTNIYKY SQPAVAGHLS IRVQMRQEGE
GYLLLISDDG LAWDVQAARM QSSGLGLLLV DMLVKQLKAS WLSCRENEIT IHRIRFSNV
|
|---|
| |