| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5965 |
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| Symbol | |
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| ID | 8362147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7573559 |
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| End bp | 7574311 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644968105 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003125584 |
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| Protein GI | 256424931 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.443482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAG CATTAATTGT CGGCGGTACA ACTGGTATGG GAAAAGCAAC AGCTGAATTA
TTGTTGCATA AAGGAGTTGA AGTAGCTATC ATTGGAAGGA GTGAAATAAA ACTCCAGGAA
GTCAAACAGG AGCTATCTAA ATTGGGCAAA GTAAGAATCT ATGCCCTCGA TCTTTCCAAA
CAAGATGAAG TAAATACTTT CAACGGTAAA CTAGCAGCTG AGCTATCAGG TCTAAAATAC
CTGGTAAATG CAGCAGGATA TTTTAACCCC AAATCTTTCC TGGATTACAC TGAAGCTGAT
TACAATATTT ACCACGATTT TAATAAGGCA TTCTTCTTTA TTACACAGGC AGCGGCGCAC
ATAATGAAGA TCAATGGTGG AGGTTCAATT GTCAATATAG GCTCTATGTG GGCTAAACAG
GCTATTAAAG CAACTCCTTC CTCAGCATAT TCTATGGCCA AAGCTGGTTT GCATAGCCTC
ACTCAACATC TGGCAATGGA ACTAGCAGAT GCAAATATTC GTGTAAATGC GGTTTCTCCC
GCTGTAGTAG TAACTCCTAT CTATGGTTCG TTCATAGATA AGAATAAGAT TGAAGAAACT
TTGCAGGGCT TTAATAGCTT TCATCCACTC GGTAGAGTTG GTCGCTCAGT TGATGTAGCT
AATACAATCG TATTCCTGCT TTCTGATGAA GCAGCATGGG TTACAGGTGC GGTCTGGGAT
GTTGATGGTG GAGTAATGGC TGGTAGAAAC TGA
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| Protein sequence | MEQALIVGGT TGMGKATAEL LLHKGVEVAI IGRSEIKLQE VKQELSKLGK VRIYALDLSK
QDEVNTFNGK LAAELSGLKY LVNAAGYFNP KSFLDYTEAD YNIYHDFNKA FFFITQAAAH
IMKINGGGSI VNIGSMWAKQ AIKATPSSAY SMAKAGLHSL TQHLAMELAD ANIRVNAVSP
AVVVTPIYGS FIDKNKIEET LQGFNSFHPL GRVGRSVDVA NTIVFLLSDE AAWVTGAVWD
VDGGVMAGRN
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