| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5882 |
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| Symbol | |
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| ID | 8362063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7473576 |
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| End bp | 7476056 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968021 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003125501 |
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| Protein GI | 256424848 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.431765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAC GTTTGCTGCT GTCAGCATTA CTATGCTATG CCGGTACAGC TATTGCTCAA
ACCGGTCCTA ATTCCACAAA ACTTGTTGGT AAAGCAGTAG ATGCTGTTAC CGGCAAACCC
GTTGAATATG CTTCTGTTGT ATTATTACAT CCACAGGATT CTTCTGTGGT GACAGGCATG
TATACCCAGC CGGATGGCGA TTTCACCTTC AACAAGGTTG CCGAAGGCAA CTATGTATTG
CGTGTCACTT TTATGGGATA CGATAAACTC GTGAAAGCCG TAAAGGTCGT ACCCAACAAA
CCCACACAGT TTGTAGGCAC CGTACGATTG CAGCCTGCGG GTAAGGTGTT AGCGACAGTA
GAGATCAAAT CTGAGAAACC CGCATTCTCC ATGCAGATCG ACCGTCAGGT ATTTGACGCC
GGCAGTATGA TCACTGCAGA AGGCGGTACA GGAACTGATG TATTAAAGAA TGTACCCAGC
GTAGATATTG ACATTGATGA TAACATTACA CTGCGGGGTA AGAGCGTAAC CATCTATGTA
GATGGCAAGC CCTCTCCTTT CGGAGACGCT AAGACGGCCT TACAGATGAT ACCTGCATCT
ACCATTGACA GAGTAGAAGT GATCAATAAC CCTTCTGCCA AATTTGAGGC ACAAGGCGGT
GGCGGTATTA TTAATATCGT ACTGAAAAAG GACAAAGCCA TTGGTTATAA TGTGATGTTC
AACGCCGGGG TAGCTACCCG CGGACAACTA ACCGGCAACG CCAATGCCAA TCTGCGGATC
CGGAAGTTTA ACTTCTTCGC CAACTACAAC GGCCGTTATG CAAGAACGGT AGGATCAGGT
TACAGCAACC GCCAGAACCT GATCGTGGAT AGCGCAGGTA CCGCATTTTT CACACAGGAC
AGCCGGAATA AAAACAGCAA TGGTGGCAAT GGCGGCCGTA TCGGACTGGA TTATTTCCTC
GATGATTATA ACACCTTTAC CATCGCACAG GGCCTGAATC TCAATACCGG CAACAGTGCA
GATGACATTA TGCTGGACTA CCTCGATGCC AAAAGACTGG CCATCAAAAA CGGAGAACGT
CATAACAGCA GCGATTATCG TAGTCCGAAT AACAATACCA GTCTGAACTT CCGGCATACC
ACCGACAAAC AAAACGAGGA ATGGACGGCT TACATCAGTT ACAGCAATAA CAGAAGCAGG
AATTACAGTA ACTACAGTAC CTTGTATAAG TTTGCCAACG GCACGCCCGA TGACAATGAT
ATACAGCGGA ATGTAGGCAA TTCAAAGAAC CAGTTCTGGA ACATACAGAC CGACTACACC
ACGCCAGTAG GCAAGAAAGG TAAATTTGAG ACAGGTGCCA AGGTGACCCT GCGGAGCAAT
GACAATGACT ACATTGCGCA ATTATTCAAC CAGACGAGCC AGCAGTTTGA ACAAAGCCTG
AGCCTTTCCA ATACTTATTA TTATAAGGAA GACATCTATG GCGGCTATTT CAACTTTTCC
AATGCGATCG GCAACCTGGG CTACCAGGTA GGCGCACGTG TGGAACAGGC ATACCTCCAT
GGCTTCTCCT ATACAAAGGA TACCTCTGTG AATAACCGTT TCCTGAACGT GTTCCCGAGT
GTGTTCCTGA AATATAACCT GCCGCATAAC GAGAATCAGA GCCTGATATT CAACTATTCT
ACCCGGGTAG ATAGACCAGG ATTCGATCAG TTGCTGCCTT ATGTCAACAA TTCCGATCCG
CAGAATATCC GGGTAGGTAA TCCTGAACTG AAGCCTTCGC TGACACATAA ATTTGAAGCG
AACTACTCCA GGTACTTCCC GAATACCAAA GATTACCTGA GCACAGGCGT TTACTATTCG
CAGGCGAACG ACGACATCGA TCGTATCAGT TTACTGGATA CTACTACCGG CGTAACCACC
ACCCGTCCGA TGAACCTGGC GACAGACAAG GACTGGGGCG CTAATTTCAC CTATAACCTG
CATATCATCC CGCGCTGGAA TGTGACGACC AACCTGAATA TGGAGTACAG CAAGCTGACA
GGAGCCAATG TGAATAATGA GTATGTTACT TATGGTATTA CAGTCAATTC CAACGTCAGA
CTGCCAGGAA AGGTAAGTAT GCAGGTGAAC GGACATTACC GTTCTCCACG GGTACAGCCG
CAGGGTACAT TTAAAGCGAT GAACGGGGTC GATATGGGTA TCAGGAAAGA GATGCTGAAA
AACAATGCGT TAGCGATTTC TCTGAATATC ACGGATGTAT TGAATACCCA GAATTACAGT
TCGCATTACG AAACAGACGC TTTCATACAG GATTATACCC GTAAAAGAAC CACCCGCTTC
ATCCGTCTGA ACATACGATA CCGTTTTGGC AAAATGGATC CGGATATGTT CAAGAAAAAG
AAGAAACAGG AGGTACCAGA AGAGGAAGCG GATGACAAGG ATAAGGAGAA AGATCGAAAA
CCTGCTGACA GCAGATTATA A
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| Protein sequence | MLKRLLLSAL LCYAGTAIAQ TGPNSTKLVG KAVDAVTGKP VEYASVVLLH PQDSSVVTGM
YTQPDGDFTF NKVAEGNYVL RVTFMGYDKL VKAVKVVPNK PTQFVGTVRL QPAGKVLATV
EIKSEKPAFS MQIDRQVFDA GSMITAEGGT GTDVLKNVPS VDIDIDDNIT LRGKSVTIYV
DGKPSPFGDA KTALQMIPAS TIDRVEVINN PSAKFEAQGG GGIINIVLKK DKAIGYNVMF
NAGVATRGQL TGNANANLRI RKFNFFANYN GRYARTVGSG YSNRQNLIVD SAGTAFFTQD
SRNKNSNGGN GGRIGLDYFL DDYNTFTIAQ GLNLNTGNSA DDIMLDYLDA KRLAIKNGER
HNSSDYRSPN NNTSLNFRHT TDKQNEEWTA YISYSNNRSR NYSNYSTLYK FANGTPDDND
IQRNVGNSKN QFWNIQTDYT TPVGKKGKFE TGAKVTLRSN DNDYIAQLFN QTSQQFEQSL
SLSNTYYYKE DIYGGYFNFS NAIGNLGYQV GARVEQAYLH GFSYTKDTSV NNRFLNVFPS
VFLKYNLPHN ENQSLIFNYS TRVDRPGFDQ LLPYVNNSDP QNIRVGNPEL KPSLTHKFEA
NYSRYFPNTK DYLSTGVYYS QANDDIDRIS LLDTTTGVTT TRPMNLATDK DWGANFTYNL
HIIPRWNVTT NLNMEYSKLT GANVNNEYVT YGITVNSNVR LPGKVSMQVN GHYRSPRVQP
QGTFKAMNGV DMGIRKEMLK NNALAISLNI TDVLNTQNYS SHYETDAFIQ DYTRKRTTRF
IRLNIRYRFG KMDPDMFKKK KKQEVPEEEA DDKDKEKDRK PADSRL
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