| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5840 |
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| Symbol | |
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| ID | 8362020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7420533 |
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| End bp | 7421636 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967979 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003125460 |
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| Protein GI | 256424807 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.564028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTTA AATATAATCA ATGGAAGGCG CTGTTAGCCA TGTCCAGGGC AAGCCTGAAA
GGAATATTAA GAAGCCCTTC AGCAGTTATC TTCAGTTTAG GGTTTCCTTT GGTATTTATC
CTGGTATTCG GCTTTATCGG CGATAATGGC GTATCAGTAA AAGTAGGCGT AGACGCTGCG
ACGGACACCA CCAGCTACCT GTACAGGCAA CTGGCAAAAG AAAAGAGCCT GAAGTTGCAG
ACGGGTCAAC CGGCGGCAGA AATGGAAGAA GACCTGAAAA AGGGACATAT TACTGCCATT
ATCCGTATCA CCTCCCAGTC GGCCGACAGC AATGCGCCGG CCTGTAATGT AAAGGTGCGT
ACCTCTAAGG CTGCAGTCGA CAAGATCTCC CTGTTCAATT CAATCCTGAC AGGCGTCATA
TATAAAGCGG ATGACAACTA TTATCCGAGA CAGTCCATCG CAAAGGTGGA ACCTATGGAA
GTGCTGCCTG GTCGTCGTTA TCGTACTATT GACTTTATTT TACCTGGTCT GCTGAGTTTT
TCACTGCTGA GCGCTGCTGT GTTCAGCACT GCTTTCCTGT TCTTTAACCT GCGTCAGACC
CTGGTGTTAA AACGTTTCTT CGCGACGCCT ATCCGTCGTC TTTATATTGT ATTGGGTGAG
GCATTGGCCC GTCTGGTGTT CCAGGTAGCC GGTGCTATCG TGATCATTGC TATCGGTTAC
TTCGCTTTCG GGTTCACCCT GGTGCATGGA TGGAGTACCT TTTTTGAAAT GCTGTTCCTG
ACAGCTTTTG GGGTGGTCGT ATTTATGGGC TTTGGATTTG TGGTGAGTGG AATTGCCAAC
AGTGAAAGTA CTATTCCGCC GATCGCGAAT GTGATCACCT TGCCTCAGTT CCTGTTGGCA
GGTACTTTTG TATCGGTAGA TTCCTTCCCT TCCTGGTTAC AACCGATCTG CCGTATTATG
CCGCTGACTT ACCTGAATGA CGCTTTTCGT AAGGTAGCCT TCGAGGGACA GCATCTCTGG
AATGTAGGAC TTGAGCTCGG TGTGATTACT GCCTGGGGGA TCGTGGTGTA TATTGTGGCA
GTAAAAGTGT TCCGCTGGGA GTAG
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| Protein sequence | MAVKYNQWKA LLAMSRASLK GILRSPSAVI FSLGFPLVFI LVFGFIGDNG VSVKVGVDAA
TDTTSYLYRQ LAKEKSLKLQ TGQPAAEMEE DLKKGHITAI IRITSQSADS NAPACNVKVR
TSKAAVDKIS LFNSILTGVI YKADDNYYPR QSIAKVEPME VLPGRRYRTI DFILPGLLSF
SLLSAAVFST AFLFFNLRQT LVLKRFFATP IRRLYIVLGE ALARLVFQVA GAIVIIAIGY
FAFGFTLVHG WSTFFEMLFL TAFGVVVFMG FGFVVSGIAN SESTIPPIAN VITLPQFLLA
GTFVSVDSFP SWLQPICRIM PLTYLNDAFR KVAFEGQHLW NVGLELGVIT AWGIVVYIVA
VKVFRWE
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