| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5824 |
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| Symbol | |
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| ID | 8362004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7399170 |
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| End bp | 7399946 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967963 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003125444 |
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| Protein GI | 256424791 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0489181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTAC GTGTCGCGAT CATAGAAGAC GAACCGGCCA CCGCCCGCAA CCTGCGTTAT
ATGATACAGG ATGTGGCGCC GGATAGTGAA ATACTGGCCA TATTGAGTGG TGTGGGAGAG
GCGGTGGAAT GGCTGCAAAG CCATATGCAG CAGTGTGACT TGTTGCTGAT GGATATCCGG
CTGGGGGATG GACTTTCTTT TGATATTTTC ACAAAGATGG AAGTTACTTT GCCGGTGATC
TTTATTACTG CATATGATGA TTATGCATTA CAGGCATTTA AAGCCAATGG CATCGACTAT
ATTCTGAAAC CGGTGGATGA AGATGATCTG AAGCATGCGA TCGCAAAATT CAAACGCTTA
CGTCAGCCAC TCACGGATAC TACGGGATAT GAAGTTCTGC TGAAGATGGC TGCGGGAATG
AGGGAAAGCC CGGTAGCCTA CAAACAATCC TTTCTCGTGC ATAACCGCGA TAAGCTATTA
CCATTAGCCG CAAGTAATAT AGCGTGGTTT TACACTGCCA ACGAACTGGT ATATGCCGGG
ACCGCAGATA AGAAGGAATT CATTATTGAT TTTACACTTG AACAGTTGCA ACAGCAGTTG
GATCCGGCTA TTTTCTTCCG TGCTAACCGG CAGTTTATTG TACAACGTTC CGCTATACAG
GAAGTAGATT TCTATTTTAA TGGTCGTTTG TTACTGAAGG TGAATCCTCC GGCAAGAGAG
CAGATTCTGA TCAGTAAAGC GAGGGGTGGA GAGTTTAAGA ACTGGATGAA TATATGA
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| Protein sequence | MSLRVAIIED EPATARNLRY MIQDVAPDSE ILAILSGVGE AVEWLQSHMQ QCDLLLMDIR
LGDGLSFDIF TKMEVTLPVI FITAYDDYAL QAFKANGIDY ILKPVDEDDL KHAIAKFKRL
RQPLTDTTGY EVLLKMAAGM RESPVAYKQS FLVHNRDKLL PLAASNIAWF YTANELVYAG
TADKKEFIID FTLEQLQQQL DPAIFFRANR QFIVQRSAIQ EVDFYFNGRL LLKVNPPARE
QILISKARGG EFKNWMNI
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