| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5814 |
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| Symbol | |
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| ID | 8361994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7387881 |
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| End bp | 7389152 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967953 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003125434 |
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| Protein GI | 256424781 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.915234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00491963 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACAC AAGCTGAAAA AGTCAATCCC TTCAGGGCAT TCCGCAATAG AAACTATGCA
TTGTTCTTTG CCGGACAATC CACTTCCCAG ATCGGCACCT GGATGCAACG TACCGCCGTC
AGCTGGGTGA TTTATTCCAT CACCCACTCA GCTTCCATGC TCGGACTCGC CGTATTTGCA
CAACAGTTTC CTTCTTTCCT GTTCTCCTTG CTTGGAGGAA TCGCATCCGA CCGCTATGAT
CGCAGGAAGA TATTACTGAT CACGCAAACC GCTTCACTGA TACAGTCCGT TTTACTGGCG
ATACTCACCT TCACCAATCA CTATATGATC TGGGAAATCA TGGCGCTCAG CGTTATCCTG
GGTATCGTCA ATGCATTTGA TACCCCCGCC AGACAACCCA TGGTACATGA CCTGGTCAGT
AACAAGGAGG ATATCACTAA CGCACTGGCG CTCAATTCCG CCATGGTAAA CATCGCACGT
CTCGTCGGTC CTGCCCTCTC CGGCATTGTA TTACAATCAT TCGGCGCACA TACCTGTTTT
ATCTTAAATG CAGTGAGCTT TCTGGCCGTA CTGGCATCCC TGTTATTTTT AAAATTACCG
CCTTTCATAC CACCTTCTAC CCAAAAGAAG GTAGTAGCCG AACTATCAGA AGGTTTCGGC
TATTTGCGGC AAACACCGCG CATAGGCGCC ATCATCTTAC TGATGATGTG TATGGCGATG
TTCGTATTTC CGTACGACAC CCTCACACCT GTTTTCGCAA AAACCATTTT TAATGGCGAC
GCCCGTACTT TTGGTTATAT CGCCAGTGCA GTAGGATTCG GCGCTGTAAC CGGCAGCTTC
TTTCTCGCGG CTTTGAAAAA GAGCGCCGAT CTTACCAACA TTCTTTTGAT CAGCATCGGC
GTATTAGGTG TTGGTTTAAT AGGATTCTCC CAATGTACCT CGTTCCTGAC AGCCCTTCCT
TTTGCGGTGA TTATTGGCGT GGCCTCACTT ACACCCGCTA CCGTCAGTAT CACAATTATA
CAGATAGAAG CCGCCGCCAG TATGAGAGGC CGTGTCATGA GTTATGTAGC TATGGCATAC
TTCGGTATGC TGCCACTAGG CAGTTTATTA GCTGGCGCCG CATCGCAACA GATATCAGCG
CCCTGGACCA TGCTCCTGCA GGGAGCAATC TCCATCATCA CAATGGTCAT ATTCTCCCGC
TATCTCAAAC AGGAACGAAT GAAGAAAAAG GAAATCCTGG AAACAGCAAA CATTGTCACC
GATAAAGTAT AA
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| Protein sequence | MTTQAEKVNP FRAFRNRNYA LFFAGQSTSQ IGTWMQRTAV SWVIYSITHS ASMLGLAVFA
QQFPSFLFSL LGGIASDRYD RRKILLITQT ASLIQSVLLA ILTFTNHYMI WEIMALSVIL
GIVNAFDTPA RQPMVHDLVS NKEDITNALA LNSAMVNIAR LVGPALSGIV LQSFGAHTCF
ILNAVSFLAV LASLLFLKLP PFIPPSTQKK VVAELSEGFG YLRQTPRIGA IILLMMCMAM
FVFPYDTLTP VFAKTIFNGD ARTFGYIASA VGFGAVTGSF FLAALKKSAD LTNILLISIG
VLGVGLIGFS QCTSFLTALP FAVIIGVASL TPATVSITII QIEAAASMRG RVMSYVAMAY
FGMLPLGSLL AGAASQQISA PWTMLLQGAI SIITMVIFSR YLKQERMKKK EILETANIVT
DKV
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