Gene Cpin_5713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5713 
Symbol 
ID8361893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7282158 
End bp7282619 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content44% 
IMG OID644967855 
Productprotein of unknown function DUF1486 
Protein accessionYP_003125336 
Protein GI256424683 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC AAAAGACAAA GGAAGAACTG AACAAAGAAG TTGTAGTTCG TTGGTTTACG 
CACTTCTGGG GAGAAACCGT TGACCTTTCA ATCATAGATG AAATTGCCGC ACCGAACATG
CTGTTGAAAT ACTCCTTGCA TGAACCACGT AAAGGTGGTG AAGACATTAA AGCTTTCATG
ACCGATTTCC GCGCTGCATT CCCAGATCTG AACTTTTGGG GCACAGCAGA TCTGATTGCT
GAAGGCGACT ATGTTGTTGG ACAATGGGAA GGTGGTGGAA CACATACAGG TATTGCTTTC
GGCGATTTCC TTGCCGGCTC TTTGCCTGAA GCCACCGGAA GAAAAATGCA CTTCACGGGT
ACAACTGTGC TGAAAGTAAT CGACGGAAAA ATAGTGGAAG AAATTGGACT TGATGACGGT
GTTACAGCTT TAACTCAACT GGGCTTGATA AAGACTGTTT AA
 
Protein sequence
MENQKTKEEL NKEVVVRWFT HFWGETVDLS IIDEIAAPNM LLKYSLHEPR KGGEDIKAFM 
TDFRAAFPDL NFWGTADLIA EGDYVVGQWE GGGTHTGIAF GDFLAGSLPE ATGRKMHFTG
TTVLKVIDGK IVEEIGLDDG VTALTQLGLI KTV