Gene Cpin_5660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5660 
Symbol 
ID8361840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7217723 
End bp7218232 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content36% 
IMG OID644967804 
Producthypothetical protein 
Protein accessionYP_003125285 
Protein GI256424632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.444903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTG ATCAAATAAA AATTGCATTG TCAGGTAAGT CTGGGTCGGG TAAAACTGAA 
ATAGCCAAAT TCCTAGCAAA AAACTACAAT CTGCGCATTT GCCATACGGG CGCTCTTGTT
AGAAAATTGG CAATTCAATA TTTTGCATCA GAATCAAAAG ATATACTCCA AAAAATCGAT
GATTCATTTA ACAATATCGA GAGAGGAGTA TGGTTAAAAG CTGCGTTAAG AGAGATTGAC
AATAACACGA GTCATATTGT TATTGACAGC CTAAGATATA TCGAAGACTA CGAATATGCA
AAGCGGAATG GTTTCTCTAT CTGGAGGATC GAATGCGAAC AAAATTCGCG ATATGATCGA
CTTAGGTCAA GGGGTCAACT CTTTTCTACA CAAAACGAAA TGCATTCAAG TGAATGCGAC
CTTGACGGAT ATCCCGTGGA TGTCCTTATC ACCAACAATT CAAACAGTCT TATAAAACTA
CATGAAATCA TTCAAGCAGT TATTAAATAA
 
Protein sequence
MNSDQIKIAL SGKSGSGKTE IAKFLAKNYN LRICHTGALV RKLAIQYFAS ESKDILQKID 
DSFNNIERGV WLKAALREID NNTSHIVIDS LRYIEDYEYA KRNGFSIWRI ECEQNSRYDR
LRSRGQLFST QNEMHSSECD LDGYPVDVLI TNNSNSLIKL HEIIQAVIK