Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5590 |
Symbol | |
ID | 8361767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7140556 |
End bp | 7141500 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644967734 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003125218 |
Protein GI | 256424565 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0480903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.681853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTG AACGGAATGC GCCGCAGTGG TTGATCATAC TGGCTTTTAT GGCGGTGTAT ATCGTCTGGG GTACGACGTA CCTGGCCGTG ATCTATGGAT TGCGGGGTTT CCCTCCGTTT ATGCTGTCCG GACTCCGTTA CCTGCTGGCG GCTATTTTGT TGCTGGGATG GTGTGGTATC AGGAGGGTAG CCTGGCCGGG ATGGTCAGTG GTAAAGGTGT GTGTAGTCAG CGGTATCCTG ATGCTGGTAG GTGGTAGTGG TATTGTGGCC TGGTCAGAGC AGTATATTAC TTCCGGACAG GCAGCTATTA TGATTGCTAC AGAGCCGTTT GTGTTTCTGC TGGCAGACAG GAAGCGTTGG CGGGAATACT TTGGGAACGT ATTTATCATT ACGGGACTGC TGGTCGGCTT TGCGGGCATT ATCCTGTTTT TCGGAGGAGG AGAGGCTGCT GCACAACAGG ACGCTGATAA TGTGATGCAA TGGGTTGGAT ACGGGGCGAT CCTGGTGGGA ACGGTGTTCT GGGTAGCCGG CGCCTTACAT GCAGAGGGAA AACTGGATAA GCGCACACCT AATATACTAA GCAGTGCCAT TCAGTTACTG GCGGCAGCTA TTGCCAGTGG CTTACTGAGC GGTATGACGG GAGAGTGGTC CCGTTTCAGG ATAGAACAGG TACCGGCTGC CGCATGGGCC GGATTATTAT ATCTCGTTTT CTTCGGCTCC CTGATAGCCT ATATGGCATT TACCTGGCTC ATAACAGTGC GTCCGCCGGC ATTGGTCAGC ACCCATACCT ACGTTAATCC CGTAGTGGCG GTGCTGATGG GCTGGGCTTT TGTAAATGAG CAACTTAGCT GGATGCAGTT ATTGGGTATG TTTGTCATAC TGGTGGGCGT ATTGTTAACT AATTTCCCCA ACTACAAACT ATCTTTTAAC AGGCAACGTG CCTGA
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Protein sequence | MNAERNAPQW LIILAFMAVY IVWGTTYLAV IYGLRGFPPF MLSGLRYLLA AILLLGWCGI RRVAWPGWSV VKVCVVSGIL MLVGGSGIVA WSEQYITSGQ AAIMIATEPF VFLLADRKRW REYFGNVFII TGLLVGFAGI ILFFGGGEAA AQQDADNVMQ WVGYGAILVG TVFWVAGALH AEGKLDKRTP NILSSAIQLL AAAIASGLLS GMTGEWSRFR IEQVPAAAWA GLLYLVFFGS LIAYMAFTWL ITVRPPALVS THTYVNPVVA VLMGWAFVNE QLSWMQLLGM FVILVGVLLT NFPNYKLSFN RQRA
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