Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5579 |
Symbol | |
ID | 8361756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7126268 |
End bp | 7128706 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644967723 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_003125207 |
Protein GI | 256424554 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.761851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTCG GCAGAGCGGT GTATACATTT TTTCTTTGCA AAAAATTCTA CCACCTAGTG AAACATATAT ACCTGATTCT GATCTTAGCT TTATGTCATC TCGCTGCCTT TGCACAAAAT GGCAATATTA AAGGAAAAAT AACTTCTGCA GATGGCCATC CGGCCGCATT TGTCACCGTC GGACTGAAAG ACACTAAAAA AGGTGCTGTT ACCAGCGAAG ACGGAGCGTT TATACTGAAG AACGTCCGAC AGGGTGAACA TGTACTGATC ATCTCCTGCA CAGGTATGAA AACAGTACAG CAACCTGTAA GTGTGACCGC CGACCAGACC ACCGATATTT CCCTGGCACT GGAAGCGACT TCCGCCCAGC TGAATGAAAT CGTAATAGAA GGCAGCAGAA CACGTACGAT CAACAAACGT CCTGTTACTG TAAGCAAGTT GCCGGTAGCG GCGATCGATC TGCCACAGGG TGTTGCGGTG ATTGGTCATG AAGTGCTGGA AGATCAGCAG GTACAGCGTA TGAGTGATGT GGTGAAAAGT GTGAACGGTG TTTATATGGC TTCCAGCAGG GCAGGTACCC AGGAGTCTTT TAATGCAAGA GGTTATGGAT TCTCCAGCAC CAATATGTTT AAAAACGGCG CTCGTGTGAA TTCCGGTGTA ATGCCGGAAA TGAGTTCCCT GGAAAGAGTA GAGATCCTGA AAGGCAGTGC GGCCATCCTG TATGGTAACG TTGCACCAGG TGCGGTGATG AACATGGTGA CCAAACAGCC AAAGTTTAAC TTTGGTGGTG AAGTAAACGT TCGTGCCGGT AGCTACGGAC TGTTCAAACC CGCTTTTGAT GTATATGGTC CGCTGTCCTC TAAAATAGCT TACCGTGTTA ACGGCACTTT TGAAACGACT GACAGCTATC GTGATAAAGT ACATTCTAAA CGTTATTATG TTAATCCGTC TTTACTCTTC AAATTAAGCG AACGTACAAC ACTGATCGTA CAGGGCGATT ACCTGAAACA TGATTTCACT CCTGATTTTG GTATCGGTTC ACTGGATAAT ACAAAGATCG CTGATGTACC ACGTAACAGC TTCTATGGTA CGTCATGGCA ATATGCGCAT ACTCAGCAAT CATCTGCCGG CGCTTCTATC AAGCATCAGC TGAACGACAA CTGGACCCTC AATGGTATGT TTACTTACCA GCGTTATAGC AGGGACTATT ATGCCATTGA AAGAATTCAG GCAGATGCAA ATGGTAAATG GGCTCGTCCG CTGAACAGGG CATATAACTC CGAAGATTAT TATATCGCAC AGCTGGACCT GACCGGTAAA TTCAAAACTG GAAGTCTGCA GCACAATGTA CTCGCAGGCG TTGACGGCGA CCGCTATTAT ACAAAAGCAT TTTCTTACAA TCAGCCAACT ACTTACGATA CGATCAATAT CCTGAACCCG GACCTGTACA CACCACGTAC AGACATGCCG GATGCTTCCA GGATCAAGCG TGTTACTACC CCGATCAACC GTCTGGGTGT ATATGTACAG GACCTGATCA AAATCAACAG TAAACTGAAC TTCCTGGCAG GCGTACGTTT CTCTTATCTG CAGAATGAAG CGCCTGTCAC CCTTGATCTT AAAACCAATG GGTCGACACA GACCAAGGCA AAATATGATC ATTCATTCTC CCCGCGTTTC GGACTGGTAT ATAAACCGAT CGAAAGCACC GCGGTATTTG TCAGCTACGC TAACTCCTTT ACACCTAACA ACGGTTTAGA TGTTGACAGC AATGCGCTGA AACCATCTGT GATCGATCAG TATGAGGTGG GTATTAAAAA CGACTTCCTG AAAGGTAAAC TGTCTGTAAA TGTGACTGCT TACCAGATCA GAAATAATAA CTACGCACAG ACGTCTCCTT TCCAGAAAGA TGGTGTGACG CCAAACAATA ACGCTAACCT GAAAGCGCTG ATCGGTAAAA CCCTCAGCCG TGGTGTGGAA GTGGATATCG CAGGCCATCC GATGGCGGGT CTGGATGTGA TCGCAGGTTA TAGCTACAAC AATATCACTA TCGAAAGCAC CAGTGGTGTT GTAGGTGGTG CGGTGGAAGG CGAGCGCCTG GTAGGTAATC CGAATCATAC TGCGAATGCC AGCGTGTTCT ATACCTTGCA GCAGTCAGCA TTGAAAGGTG TGAAATTTGG TGTAGGTTAT TACTATATCG GACAACGTTT CGCGGGTTGG AACAATACTA TCAATCAGTC GCAGAAATAT AACCGTCTGA TCTCCGTACC AGGATTCTCT ACACTGGATC TGAGTGCCGG TTATTCTTTC AAACGTTTCG GTGTGATGGC AAAAGTATCC AACATCACGA ATACTTATAA CTACTACGTA CACGAGAACT ACAGCATTAA TCCGATACCA CCGACCCAGT TTGTCGGTAC GGTATCTTAT AAATTTTAA
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Protein sequence | MRLGRAVYTF FLCKKFYHLV KHIYLILILA LCHLAAFAQN GNIKGKITSA DGHPAAFVTV GLKDTKKGAV TSEDGAFILK NVRQGEHVLI ISCTGMKTVQ QPVSVTADQT TDISLALEAT SAQLNEIVIE GSRTRTINKR PVTVSKLPVA AIDLPQGVAV IGHEVLEDQQ VQRMSDVVKS VNGVYMASSR AGTQESFNAR GYGFSSTNMF KNGARVNSGV MPEMSSLERV EILKGSAAIL YGNVAPGAVM NMVTKQPKFN FGGEVNVRAG SYGLFKPAFD VYGPLSSKIA YRVNGTFETT DSYRDKVHSK RYYVNPSLLF KLSERTTLIV QGDYLKHDFT PDFGIGSLDN TKIADVPRNS FYGTSWQYAH TQQSSAGASI KHQLNDNWTL NGMFTYQRYS RDYYAIERIQ ADANGKWARP LNRAYNSEDY YIAQLDLTGK FKTGSLQHNV LAGVDGDRYY TKAFSYNQPT TYDTINILNP DLYTPRTDMP DASRIKRVTT PINRLGVYVQ DLIKINSKLN FLAGVRFSYL QNEAPVTLDL KTNGSTQTKA KYDHSFSPRF GLVYKPIEST AVFVSYANSF TPNNGLDVDS NALKPSVIDQ YEVGIKNDFL KGKLSVNVTA YQIRNNNYAQ TSPFQKDGVT PNNNANLKAL IGKTLSRGVE VDIAGHPMAG LDVIAGYSYN NITIESTSGV VGGAVEGERL VGNPNHTANA SVFYTLQQSA LKGVKFGVGY YYIGQRFAGW NNTINQSQKY NRLISVPGFS TLDLSAGYSF KRFGVMAKVS NITNTYNYYV HENYSINPIP PTQFVGTVSY KF
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