| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5485 |
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| Symbol | |
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| ID | 8361662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6994033 |
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| End bp | 6995046 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967631 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003125115 |
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| Protein GI | 256424462 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.996805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0475249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC AACCTGATAT CGATGTCGTT ATCCGCTACC TGGAGGAACC AGGGAATGAG
GAGCACAAAC GTTCACTGGA TGAATGGTTG CAGCTGGATG CTGCCAATCT GGATATCTTC
CTGGAAACGA AAGCTTTGTG GCAAGGAGAC GTATTGCCCA CGGCTGCTTC CTACGATGTC
GCACATCAAT GGCAGTTAAT CGACGCACAG CTCACAGCTA CCACTATCCC TGCCGTAACA
GCAACCCTGC CTCCTGTACA ACCGGTACAG ACAGTACAGG CCCCTGCCAA AGGAAAGGTC
AGAGCCCTGT CTACCCGTAC CTGGTGGGCA GCCGCAGCAG CAGCTATCGT GATAGCAGCG
GCAGTCATCA TCTACCGCCA ACCTTTATAT ATAGCGCAAC AAACCGCTCA GAATACAGAC
AGTCTTTTAC TGCCCGACGG CACCCGTTTA TACCTGAATG CCCACACCAG CGTGAAATAC
CCCCGCAATT TCCAGAAAAA CAGCAGGGAC GTATTTGTAC AACAGGGTGA AGTATTCGTA
GATGTAAAGC ACATGCCGGA AAAACCCTTC TCCGTCCACC TGAAAAACGT TGACATCGAA
GTATTGGGTA CCTCTTTTGA TGTAAAAGAA ACCAAACAAG GTGTAAAAGT CTTCGTACAG
AGCGGAAAAG TAAAAGCCGT ATATAAAAAT GGTAAAAAGT CTGTAGTCCT CACTCCCGGC
GAAGAAGCAG AAATGCTGCT GGCAGGTACG ACTATCAGCA CCCGTCATCA CCGGAACAAT
AATCCAATCG CCTGGAAAAC AGGCCAGCTC ACCTTTGTGG ATGCTCCGCT TTCAGAAGTG
GCTGACGTAC TGGAAGATTA CTATAAAGTA AAGATTGTTG TTGCTGAAGG ACTGGCAGAC
AAAAAACTGC TGGCTACTTT CCATAAAGAA TCTCTGTCAG AGGTTCTGGA CATTCTATCC
AAAACATTAC AGGTAAAGGC CGTACAAAAA GATAGCCTTG TAGAAATTTA TTAG
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| Protein sequence | MKQQPDIDVV IRYLEEPGNE EHKRSLDEWL QLDAANLDIF LETKALWQGD VLPTAASYDV
AHQWQLIDAQ LTATTIPAVT ATLPPVQPVQ TVQAPAKGKV RALSTRTWWA AAAAAIVIAA
AVIIYRQPLY IAQQTAQNTD SLLLPDGTRL YLNAHTSVKY PRNFQKNSRD VFVQQGEVFV
DVKHMPEKPF SVHLKNVDIE VLGTSFDVKE TKQGVKVFVQ SGKVKAVYKN GKKSVVLTPG
EEAEMLLAGT TISTRHHRNN NPIAWKTGQL TFVDAPLSEV ADVLEDYYKV KIVVAEGLAD
KKLLATFHKE SLSEVLDILS KTLQVKAVQK DSLVEIY
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