Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5433 |
Symbol | |
ID | 8361610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6944649 |
End bp | 6945308 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967579 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_003125063 |
Protein GI | 256424410 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.591445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.901905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAAACA GAAACACATT TATCGCACCG TCTCTCCTGG CGTCCAATTT CCTGGAGCTG GGTAAAGAAG TTGAGATGTT GAATCGCAGT GAGGCGGATT GGTTGCACCT GGACGTAATG GATGGCAGAT TCGTACCGAA TATCAGTTTT GGCTTGCCGG TGATCTCACA GCTCAGAAAG GCGACCACAA AGACCTTTGA TGTACATCTG ATGATTGAAG AGCCGGAGAA ATATGCAGAG GATTTTAAGA AAGCGGGCGC TGACCTGCTG ACGGTGCACT ATGAAGCCTG CACACACTTA CACAGGAATA TACAACAGAT CAAAAGTCTG GGCATGAAAG CAGGTGTGGC ATTGAATCCG CATACACCGG TGCATCTGCT GGAGAATATT ATCAATGATA TCGATCTTGT ACTGATCATG AGTGTGAATC CTGGTTTCGG CGGACAACAC TTCATTCAGA GAAGCCTGGA TAAGATACGC CAGACACGTG AGATGATCAA TCACTACAAG GCACATGCGC TGATTGAAGT GGATGGCGGT ATTACATTAG ATAATGCGGC GAGTATACTG GATGCAGGTG CTAATGTGCT GGTAGCGGGT AGTTCGGTGT TTGCGTCCAA AGATCCGGAA GCAACGATCA GTGCGTTGAG AAAAGCATAA
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Protein sequence | MENRNTFIAP SLLASNFLEL GKEVEMLNRS EADWLHLDVM DGRFVPNISF GLPVISQLRK ATTKTFDVHL MIEEPEKYAE DFKKAGADLL TVHYEACTHL HRNIQQIKSL GMKAGVALNP HTPVHLLENI INDIDLVLIM SVNPGFGGQH FIQRSLDKIR QTREMINHYK AHALIEVDGG ITLDNAASIL DAGANVLVAG SSVFASKDPE ATISALRKA
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