Gene Cpin_5423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5423 
Symbol 
ID8361600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6932944 
End bp6934092 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content49% 
IMG OID644967569 
Productmonooxygenase FAD-binding 
Protein accessionYP_003125053 
Protein GI256424400 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.224517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.231326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA TTAAAAACAA AAAAATTGCT ATCGTCGGCG GTGGCCCGGG TGGCCTTACC 
CTCGCCCGAA TACTTCAAAT GCGTCATGCA GATGTTACCG TATATGAACG CGATATCAGC
AAAGACGCCA GGGCACAGGG CGCTACTCTC GACCTGCATC ATGAATCAGG TCTCCGGGCA
TTGGAAGAAG CCGGGTTGAT GGAAGCCTTC AAAGCTAATT TTCGTCCAGG CGCCGACAAA
ATGCGTATCA TCGACCAACA CGGGACTATT TTACTGGAAG ACAATCATAA AGACGAAGGA
CCTGTAGAAG CCTATCGTCC GGAGATTGAC CGTGGACCGC TAAAGAAAAT ACTGTTGGAA
TCCCTGCATC CGGAAACTGT TATATGGAAT AGTCAGTTTA GCTCCCTTTC GCCCTTTAAT
GAAGGCTGGC AACTGCACTT CAAAGACGGT CAGACGGCCT ACGCAGATAT CGTTATTGCA
GCAGATGGTG CTAACTCAAA AATACGCCCG TACATCACCC CCATACGTCC TTTCTATTCC
GGTGTAACGG CTGTGGAAGG TGCTGTATAC AATTCAGAGA AGAACAGTCC GCAGATACAT
GCATTACTGA ATGGTGGTAA GATCTTCTGC ATGGGTGATA ATAAAACGCT GATCGTAAGC
TCTAAAGGGG ATGGTAGTCT CGTCTTTTAT CCCAGCTTCA AAACAACGGA AAACTGGACA
CAGGAATCAG GCATCGACTT TACAGATAAA GCACAGGTAC TCGCCTGGTT TAAGTCAAGT
TTTACAGGCT GGAGCCCTGT ATGGGAAGAA CTGTTTGAAA ATGCTACAGG CGCCTTTATA
CCAAGACCAC TGTATTGTAT GCCATTCGAT CAGACATGGG AAGCATTACC CAATCTGACA
ATGCTGGGAG ACGCTGCACA TCTGATGCCG CCCTACGCAG GAGAAGGTGT GAATATGGCC
ATGCTGGATG CATTGGAACT TGGCCTTTGT CTGACCAGCC AAGACTATCC CGACACCCTT
AGCGCAATCG CTGCATATGA AGAAGCAATG CGCACAAGAG CATCCGCCAC TGCACAGATG
ACAATGGAAT CTACAGCCGC CCTGCATTCG CCGGAGGCGA TCTCATTCCT GACACAGATC
GTCAGCTGA
 
Protein sequence
MNNIKNKKIA IVGGGPGGLT LARILQMRHA DVTVYERDIS KDARAQGATL DLHHESGLRA 
LEEAGLMEAF KANFRPGADK MRIIDQHGTI LLEDNHKDEG PVEAYRPEID RGPLKKILLE
SLHPETVIWN SQFSSLSPFN EGWQLHFKDG QTAYADIVIA ADGANSKIRP YITPIRPFYS
GVTAVEGAVY NSEKNSPQIH ALLNGGKIFC MGDNKTLIVS SKGDGSLVFY PSFKTTENWT
QESGIDFTDK AQVLAWFKSS FTGWSPVWEE LFENATGAFI PRPLYCMPFD QTWEALPNLT
MLGDAAHLMP PYAGEGVNMA MLDALELGLC LTSQDYPDTL SAIAAYEEAM RTRASATAQM
TMESTAALHS PEAISFLTQI VS