| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5411 |
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| Symbol | |
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| ID | 8361588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6918112 |
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| End bp | 6919872 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967557 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003125041 |
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| Protein GI | 256424388 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.42814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0980193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGTG TGAACGCGCA GTCGAAACAC ACCTTCGCCC TTTCTAAAAA AGACTTTTTA
CTCGACAGCA AACCCTATCA GATCATCAGT GGCGAAATGC ACCCTGCACG TATCCCGAAA
GAATACTGGC GTCATCGCAT CCAGATGGCC AAAGCCATGG GATGTAATAC CATCGCTGCT
TATGTGTTCT GGAACTATCA TGAACAGGAA GAAGGCAAAT TCGACTTCAC CTCTGAAAAC
AGGGACATCG TTGCCTTTAT CAAAATGGTA CAGGAAGAAG GGATGTGGGT AATGCTACGT
CCTGGTCCTT ATGTATGTGC CGAATGGGAA TTCGGCGGAT TACCGCCTTA TCTGCTGAGA
ATACCGGATA TCAAAGTGCG TTGTATGGAT CCAAGATATA TCGCGGCAAC GGAAAGATAT
ATCAAAGCCT TGTCTGAAGA GGTAAAACCG TTACAAATCA CTAACGGAGG ACCGATCGTG
ATGGTGCAGG TAGAGAATGA ATATGGCAGC TTCGGTAACG ACAGAGAATA CATGCTTAAA
GTAAAAGACA TGTGGGTACA GAATGGTATC AATGTGCCTT TCTACACAGC CGACGGACCA
GTATCTGCAC TGCTGGAAGC AGGATCAGTA CCAGGGGCTG CTATCGGACT GGACTCCGGC
AGCTCTGAAG GTGATTTTGC CGCTGCAGAA AAACAGAATC CGGATGTACC CTCTTTCAGC
AGTGAGTCTT ATCCAGGCTG GTTAACACAC TGGGGAGAGA AATGGGCGCG TCCTGATAAA
GCAGGTATTG TGAAGGAAGT AAAGTTCCTG ATGGATACCA AACGCTCCTT CAACCTTTAC
GTGATCCACG GAGGCACCAA TTTCGGCTTC ACCGCTGGCG CGAATTCCGG TGGTAAGGGG
TATGAGCCGG ACCTGACGTC TTATGACTAC GATGCGCCTA TAAATGAGCA GGGAGACACT
ACGGCGAAGT ATAATGCACT GCGTGACCTT ATTGGCTCTT ATAGTAAGAA AAAACTGCCG
GCTATTCCGA AGGCCATTCC AACCATCACC ATCCCTGACA TACCACTGAA ACCATTCACC
AGCGTATGGG AGAATCTGCC TGCTGCGGTG AAGTCTGTAC AACCGAAGAC CTTCGAAGCC
TACGGACAGG ACTATGGTTA CATGGTATAC AAAACAGTGC TGGTAGGACA TAAAAGCGGG
AAACTGGATA TCCTGGAACT GCACGACTAT GCCACTGTAT TCCTCAATGG TAAATACGTA
GGTAAGATTG ACCGCAGACT CGGAGAACAT AGTATAGAAC TGCCTAAATC AGACGTAAAA
GACCCGGTAC TGGAAATATT TGTTGAAGGT ATGGGCCGTA TCAACTTCGC ACAGGCACTG
ATAGACCGTA AAGGTATCAC TGACCGTGTA ACGCTGAATG GGATGACCCT GATGAACTGG
GAAGTATACG GTCTGCCAAT GAAGAGCGAT TTCGTTCAAA ACCTGCCTGC GTCTAAAACC
GGACAGGTAA AAGAAGGCGA ATTCTTCAAA GGTACCTTCA CGCTGACTAC TACCGGCGAC
ACTTACCTCG ACATGACCAA CTTCAAAAAA GGGATGGTAT GGGTAAATGG TCATAACCTG
GGTCGCTACT GGGAGATTGG GCCGCAGAAA CGTTTATACT GCCCTGCACC ATGGCTGAAG
AAAGGAGAGA ATGTGATCGT GGTGTTAGAT CAGCATCAGC TGGAAGCAGC TACTATCAGA
GGAGAAAAGA AACTTGACTA A
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| Protein sequence | MGSVNAQSKH TFALSKKDFL LDSKPYQIIS GEMHPARIPK EYWRHRIQMA KAMGCNTIAA
YVFWNYHEQE EGKFDFTSEN RDIVAFIKMV QEEGMWVMLR PGPYVCAEWE FGGLPPYLLR
IPDIKVRCMD PRYIAATERY IKALSEEVKP LQITNGGPIV MVQVENEYGS FGNDREYMLK
VKDMWVQNGI NVPFYTADGP VSALLEAGSV PGAAIGLDSG SSEGDFAAAE KQNPDVPSFS
SESYPGWLTH WGEKWARPDK AGIVKEVKFL MDTKRSFNLY VIHGGTNFGF TAGANSGGKG
YEPDLTSYDY DAPINEQGDT TAKYNALRDL IGSYSKKKLP AIPKAIPTIT IPDIPLKPFT
SVWENLPAAV KSVQPKTFEA YGQDYGYMVY KTVLVGHKSG KLDILELHDY ATVFLNGKYV
GKIDRRLGEH SIELPKSDVK DPVLEIFVEG MGRINFAQAL IDRKGITDRV TLNGMTLMNW
EVYGLPMKSD FVQNLPASKT GQVKEGEFFK GTFTLTTTGD TYLDMTNFKK GMVWVNGHNL
GRYWEIGPQK RLYCPAPWLK KGENVIVVLD QHQLEAATIR GEKKLD
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