| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5407 |
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| Symbol | |
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| ID | 8361584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6912408 |
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| End bp | 6914243 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967553 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003125037 |
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| Protein GI | 256424384 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000690953 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.146113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAG TTACTATGGC AGAGAATATC TCTACCATCG AAATCATTAC CAGCCCTTCC
GCAAAATACG ATGCTGCGGG TAAAAGCGGC ATCATCAACA TCAAGACTAA AAAGACCATT
ATCACTGGTA TAAACGGCTC TTATAACCTG ACTGTTGGTA CCGGTAAATA CGGGATGTAT
ACAACAGGGT TGAACCTTAA CTGGCGGACT GAAAAATTCA ACCTCTTTGG CAACTATAAC
AACGGTAACA GGGGCTTCTT CCAGACCCGT TATATAGAGC GGCATATCTC CGGCGATCAG
CCCATATTGT TTGTATCAGA TGTTTACAAC AGACGTCGTT TTAAGAACAA TAATTACAAG
GCAGGATTTG ACTATTTCAT CAACAGCAAA CATACGGTTG GTGCGCTTGT AAGAGGATAC
AGCAACTCTT TCTCGCAGGA TGGTTTTAAT ACCAATCCAA TCAGCAGTAA TGGGAAAGTC
GATTCAACGC TTTACTCCAA TACAACGATC AGGAACAAGT TTTCCAATGT TTCTTTTAAT
CTGAATTATA AAGGCCAGCT GGATACTTTG GGGACAGAAA TATCAGCAGA TGCCGACTGG
GCAGAATTTA AAGACAATAA CAACATGCTG TTGAACGACA GCATGTCCTA CCTGGTGGAC
CCGGTATTGA ACTACCACTC CATCCGTAAC AGACCGATCA ACAATGTAAC CATTAAAAGC
GTCAAAGCCG ACCTGGTACT GCCGTTCAAC AAAACCACCA AACTGGAGAC CGGTTTTAAG
CTCAGTTCTG TAAAAACAGA CAATGACCTT CGCTATGACT CCCTGCTGAA TGGCAAGTAT
GAACGGGCGA TCACACAGAG CAATCAGTTT ATTTACACAG AGACCGTTTA CGCCGCTTAC
CTGATCTTCA AAAAGCAGAT CCGGAATACG GATATCCAGG CGGGTCTGCG TGCGGAACAG
ACAAAATCTG ACGGTTATTC CGTGACCTTA CAATCACACG TAAAACGCTC TTATCTGGAC
TTCTTTCCCA GCCTTTCTGT GGATCAGAAG CTCAGCGAAA ATCATAAGAT CGGGGTAAAC
TATTCGAAGC GTATTTCCAG GCCGAATTAT GGCGATCTGA ATCCGTTTGT CTGGTACATC
GATAAGTACA ATTATTTCAA AGGGAATCCT TATCTGTTGC CGGAATACAC GCATAAGGCG
GAGATCAGCT ATACCTTCAA ACAGAAGTAT GTGGCGGCTC TCTCCTACGG ACTGACCAAG
AACATCGTAC TGGAGTATAT GATCCAGAAT GATACTTCGA AAGTAACCAC TTTCTATGAC
AGGAATTTCG AGCGGAGTTA TGTATACGGC ATTACGCTGA CGATCCCGAT AGATCCTTTC
AAATGGTGGA ATATCACCAA TAACATCAAC GCCAATCGTA CGGCATATGA TGTGAAGGAT
ACGATGGTCA ATCTGGCAAC AAATACCTGG GGCCTGAACT ATCAGACGAC CCATACTTTC
ACTTTACCCC AAGACTGGAA GCTGGAACTG AACGGTTATT ATGAGAGTCC GTTTGTCTGG
GGAGTATACA AAATAAGGTC TTCCTTCGCC ATTGGCGCAG GTGTACAGAA ATCTTTCATG
AATAAGAAGC TGGTTGCGAA GCTGAATGTC TCTGACATTA CCAACCGCGA GCAGTTCCGT
GGTACTGCCA GATTCGACAA TATCGATATG TACATCAATA ACCGCTGGCA GAACAGGCGC
GTGAACCTTG CACTGACCTG GAATTTTGGT AACAGCAACA TAAAAGCAGC CCGTGACAGA
GAAGCGGGTG CTGAACAACA AAGGGTAGGC GGTTAA
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| Protein sequence | MARVTMAENI STIEIITSPS AKYDAAGKSG IINIKTKKTI ITGINGSYNL TVGTGKYGMY
TTGLNLNWRT EKFNLFGNYN NGNRGFFQTR YIERHISGDQ PILFVSDVYN RRRFKNNNYK
AGFDYFINSK HTVGALVRGY SNSFSQDGFN TNPISSNGKV DSTLYSNTTI RNKFSNVSFN
LNYKGQLDTL GTEISADADW AEFKDNNNML LNDSMSYLVD PVLNYHSIRN RPINNVTIKS
VKADLVLPFN KTTKLETGFK LSSVKTDNDL RYDSLLNGKY ERAITQSNQF IYTETVYAAY
LIFKKQIRNT DIQAGLRAEQ TKSDGYSVTL QSHVKRSYLD FFPSLSVDQK LSENHKIGVN
YSKRISRPNY GDLNPFVWYI DKYNYFKGNP YLLPEYTHKA EISYTFKQKY VAALSYGLTK
NIVLEYMIQN DTSKVTTFYD RNFERSYVYG ITLTIPIDPF KWWNITNNIN ANRTAYDVKD
TMVNLATNTW GLNYQTTHTF TLPQDWKLEL NGYYESPFVW GVYKIRSSFA IGAGVQKSFM
NKKLVAKLNV SDITNREQFR GTARFDNIDM YINNRWQNRR VNLALTWNFG NSNIKAARDR
EAGAEQQRVG G
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