| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5396 |
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| Symbol | |
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| ID | 8361573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6900445 |
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| End bp | 6903516 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967543 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125027 |
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| Protein GI | 256424374 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.25584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TCATTGCACG CTGTAGTATC GCTTTATTCC TATGCCTGCC AACCATCATT
GTGAATGCGC AGCAGCGAAA GATTACGGGA AAGGTTTTCG ATGATCAGTC AAAACCACTC
CCCGGCGCTA CAGTAGTCGT AAAAGAAACA AAGACGGCCA CCGTCAGCGA CGGTGACGGC
AGATTTGTCA TGGATGTTCC GGGGGCGGGG AAGACAATCC AGGTAACTTA TGTAGGGATG
CAGACAAAAG AGATCCCATT GGGTACACAA AATGATTTTA CTGTTAACAT GCAACTGGCC
CCTGGTAGTC TGAACGACGT GGTAGTCGTA GGTTACGGGG CTGTCAAAAA AAGCGACCTC
ACAGGCGCCG TCGCCACCCT GAAAGGCGGT GATCTGAACA AGACGCCCGC CGCCTCCGTA
GATCAGCTCC TTCAGGGAAA GATCGCCGGT GTACAGGTGA CTACAGGTGG TGGTGCTCCC
GGTGCGGGCG CTACGATCCG TATCAGGGGA GCCAGTTCCC TGAATGGGTC TAAAGATCCT
TTAGTCGTAG TAGATGGTTA TCCCTGGGGA GATGCGGGTA ACCTGAAACA GATCAACCCC
GAAGATATTG AGTCTATAGA GGTACTGAAA GATGCCTCCA GTGCCGCTAT TTATGGTTCC
CGTGGCGCTA ATGGCGTGAT CGTGGTAACA ACACGTAAAG GGAAGCAAGG ACAACACCGT
ATTTCATTTA ACACCTTACA GACAATGTCG TTCCTGGAGA ATAAGCCGGA TGTATGGCGG
GATCCTGTAG AAGATGCCAC CTTTGCCAAT GAAGCTGCCA TCAATGGCGG CGCAATTGCC
ACAGATGTGC CTTATATAGG TATTTACAGA CCTGTAGGTA CAGGGATGGT ATATTTTCCT
TCAATTGCAG AATTACGCGG TTTAGACCCC AATAAACCGC AATGGCCTGT TAATACCGAC
TGGGTCGACC TGATATACCG TCATCCTTAC TCGCAGAACT ATACGCTGAC CGCCGACGGT
GGTAGTGAAA AGACGAAATA TGCCATATCG GGTAACTATT ACAATGAACA AGGTATGGTC
ATTAAAAATG GGTATGATAA GTATACCTCC CGGCTGAACC TTGAACAGAA ACTGACCAAC
GCCGTTACCG CAGGTACAAA CGTAATCCTG GCATATACAA AAGCTTCCGG ACAACAGCTT
GGCGTCGGCA GATCCAGTAT CTGGCCGGTA TATGACTCTA CGGGTAATTA TTTCCGTACC
AGCAATACCG ACTTCGGTAA TCCCATTGCT TTAGCCAATC AGCTATTGAA TACGACTAAA
ACAACTGATT TCCTTGGCAA CCTGTACGTC AATTTCAGGA TCAACAGCTG GTTACAGTTC
CGTACCTCTA TCAATGCCAA GTCAGGCAAT AGCATACAGG ACCTGTACGA TCCTAAGAAC
AGCACGCAGC GGGCGCTGGA TAATAAAGGC AGCTACGGGA GTATCGCTAA CGGCAGTTAT
TTTGATCTGC TGAACGAGAA CTATTTTACC ATCAATAAAG ATTTCGGCAA ACTGCATAGG
GCCACCCTGG TAGCAGGTTT TTCTTACCAG AAAACAGAGA ACAGGTTTAG TTCGCTGACC
GGTCAGAACT TTGTCAATGA CGTAATGCAG AACGAGAACC TGGCTACTGC CGGTACCATG
CTGATCTCCA ATTCCCTGCA GCGCTTTAAT CTCGCTTCCT GGTACGGTCG TGGTAATTAT
ACCTTCAACG ATAAATACCT GTTGACACTC ACCGCCAGAG CAGATGGTTC TACCAAATTT
GGCGCTAATA ACAAATGGGC CTTTTTCCCT TCTGCGGCAT TGGCCTGGAA AGCAGGAGAA
GAGCCTTTTA TCAGGCAACT GGGTCTTTTC TCTGAGCTGA AAGTAAGAGG TAGTTACGGC
TTGACGGGCA ACCAGGGTAT CAGTCCTTAT CAGACGCTGG ACCGTTATGG TTCTAATAAG
TATTTCACCG GCTCCGTATT TGAGACTGGT TTCGGTCCCG GACTGGCAGG CGCCAATGAC
GAACAGGGAC GTACCATTGT CGGCGGACTT GGAAATAACA GTCTGAAATG GGAAACAACC
CGCTCCCTCG ATCTGGGTGT TGACATGGGC TTCCTGGATC AGCGGATTAC TATCAGTGCC
GATTATTATA TCAAACGTAC CAGTGACTTG TTGCGGTTGA AAACTATCGC GCCCAGCGCC
GGATATGACC AGCAGTGGAT CAATGACGGA AAGATCGAGA ACCGTGGTAT AGAGATCGGT
CTGAATGCGA ATGTGATCAA TAAGGCAGAT TTCACCTGGA GCGTAGGCGG TATGTTCACC
AAAAACACCA ACAAAGTGGT GGCCATGGGA GAGAGTAACC AGGTGTTTAT TGGTTCGCTG
TATGAATCCG TGCGCCAACA GATCAGCACC TATACCGTAG GGCAGCCGAT GTTCTCTTTT
TACGGATACA AAACAGCTGG TATTATCCAG ACCCTTGACG AAGGTATCAA AGCGGGCCTG
ACCGGTGTAG ATGCGCAACC AGGCGAGATA AAATACCTGG ATGTCTCCGG TCCGGATGCT
AAGCCGGATG GTATCGTTGA CTCTTATGAC CGTACAATTA TCGGCAATCC TAATCCTGAT
TTTATTTATA GTCTGAATAC CAATGTGCGC TATAAACAGT TCGACTTGTC CATGCAACTC
TATGGTGTGC AAGGCGGAGA CGTCTGGGAT TTCCAGAAAA TGACTGCCAG CCGCTGGCTA
CAGCGCTGGA CGCCGGATAA TCCCAGTATG GCATATCCAA GGGCAAATGG TACCCGTGGA
TGGCGAGCTT CCGATTTCTA CCTGACAGAC GGCTCTTTCC TGAGAGTGCA GAACGTAACA
TTTGGTTATA ACCTGAAAAC TGATGCGGTG AAATTTGTGA AGAGTCTCCG GGTATACCTG
TCGGGCAATA ACCTCTATAC CTTCACCGGC TTCAATAAAG GCTTTGATCC GGAAGTAGGG
GAGAGTGGTA TCAACAACGG CGCATATCCA CGTCCGCGTG CTCTATCCCT GGGCGCTAAT
GTAGTATTCT AA
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| Protein sequence | MKNFIARCSI ALFLCLPTII VNAQQRKITG KVFDDQSKPL PGATVVVKET KTATVSDGDG
RFVMDVPGAG KTIQVTYVGM QTKEIPLGTQ NDFTVNMQLA PGSLNDVVVV GYGAVKKSDL
TGAVATLKGG DLNKTPAASV DQLLQGKIAG VQVTTGGGAP GAGATIRIRG ASSLNGSKDP
LVVVDGYPWG DAGNLKQINP EDIESIEVLK DASSAAIYGS RGANGVIVVT TRKGKQGQHR
ISFNTLQTMS FLENKPDVWR DPVEDATFAN EAAINGGAIA TDVPYIGIYR PVGTGMVYFP
SIAELRGLDP NKPQWPVNTD WVDLIYRHPY SQNYTLTADG GSEKTKYAIS GNYYNEQGMV
IKNGYDKYTS RLNLEQKLTN AVTAGTNVIL AYTKASGQQL GVGRSSIWPV YDSTGNYFRT
SNTDFGNPIA LANQLLNTTK TTDFLGNLYV NFRINSWLQF RTSINAKSGN SIQDLYDPKN
STQRALDNKG SYGSIANGSY FDLLNENYFT INKDFGKLHR ATLVAGFSYQ KTENRFSSLT
GQNFVNDVMQ NENLATAGTM LISNSLQRFN LASWYGRGNY TFNDKYLLTL TARADGSTKF
GANNKWAFFP SAALAWKAGE EPFIRQLGLF SELKVRGSYG LTGNQGISPY QTLDRYGSNK
YFTGSVFETG FGPGLAGAND EQGRTIVGGL GNNSLKWETT RSLDLGVDMG FLDQRITISA
DYYIKRTSDL LRLKTIAPSA GYDQQWINDG KIENRGIEIG LNANVINKAD FTWSVGGMFT
KNTNKVVAMG ESNQVFIGSL YESVRQQIST YTVGQPMFSF YGYKTAGIIQ TLDEGIKAGL
TGVDAQPGEI KYLDVSGPDA KPDGIVDSYD RTIIGNPNPD FIYSLNTNVR YKQFDLSMQL
YGVQGGDVWD FQKMTASRWL QRWTPDNPSM AYPRANGTRG WRASDFYLTD GSFLRVQNVT
FGYNLKTDAV KFVKSLRVYL SGNNLYTFTG FNKGFDPEVG ESGINNGAYP RPRALSLGAN
VVF
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