| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5324 |
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| Symbol | |
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| ID | 8361501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6798984 |
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| End bp | 6801116 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967472 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003124956 |
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| Protein GI | 256424303 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0890511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CACTACCCAT ACCTTTTAGT TTATGTCTCC TGGCAATAAG TGCACAGGCG
CAACAAAAGA CCGACAGTCT GCGAAAGCAG CACCTGAAGG AAATAGAGAT CATGGAAAAG
AAGAAGAACA TGCGCACAGA CAGTATGTCG CCGGTACTCC GGATGGAAGG TCGTATGTTG
GAAATACCAC AAAATATCAC AGGTGTCACC GCCGATCTTA TACGTGAACA GGGAGGCCTG
GAAATGAAAG ATATTATCCG TAATGCCAGT GGCGTTAAAA TAGGCTATAA CAGCTCTGTT
TTTGATGCTT CTGCCACTGT CATGATGCGG GGCTTCTATA CAGACACATA TGTCAATGGT
ATGCCCCAGC GTAGTACAAT GGGCGCGCTG ACAGACGATG CCGCTTTTAT TGAACGGGTT
GACTTTGTCA AAGGACCCGC CGGTTTTCTG ATCTCCTCCG GCGATCCAGG CGGTAGTGTC
AACATCACCA CCAAGACGCC CCGGCAACAG CGTGTCCGTC AGCTGGAATT GTCAGGCGGC
AGCTTCGGCT TCCTGCGCGG ATCACTGGAT CTGGGTAGTG CCGTAAAAGA GAAAGGTTTC
TCATATCGCC TGAATGGCGC CTATCAGCAG CAACAGAGTT TCCTGGATTT CCTGAAAACC
AGGAAATATG TGGCGTCGCC AGTTATACAA TATAATTTCA GTCGACGGAC TTCCCTGCTT
GCTGAATACA ACTTCATTCA TATGCTCTCA GACGGTGGCA GCAGTGTTAC CAAAATCGGT
ACCGAATCCG AAGTACTGAA AGACCGCATC GGTAACAACT ACGCAGGCGA TCCTAACCTG
CCACAGTCAG GGTCGAAGTC GCAAAGCATC AGACTCGCAT TCGAACACCG CTTTAATGAT
CATCTGCGAC TGACCATACA ATCAAAATAC ACGGTCAACT CTACTGCCGT ATGGTACCTC
ATATCAGATA ACTACTCGCT GATTAACTTC GACAGTACCA ACATTACCCG CCGCCTGCCG
GTAAACAATA GCATCACCGG ACGTGTGGCA GCGGTACAAG CTTATCTCAG CGGTAACCTC
AAAACGGGTC AGCATATTAC GCACAACTTC GTTGCCGGAC TCGATTACAA CTACAGCAAA
GACAACTATG TGAATGCTTA TGGTCAATAT GCGTTTACGT TTGACAGAAC TCATCCGCAA
TATGGCCTCC ATCCGGATAG TGTAAAAATG CTGGGCAAGC CTGCATTGAT TGTCAGAGAA
AATAACTGGA CTTCCGCATT CGCCTATAAT ACAACCCGCA TTCATACCAA CTGGTTGTTC
AATTACGGCG GACGTCTCAC AATCAATACG CCCGTCACCA CGAATCCAAG GCAGCCGCAA
AAAGATGAAA CGGCCTTTTC CCCCAGGCTG GGTATTACAC GACTGCTGAA CAACAATATG
GCTGTCTACG CTTTATATGA CCAGTCATTT ATTCCGCAGT CAGGTGTAAA TGCTAACGGA
CAACGATTCG ATCCTCAACG TGGCAACAGC TTAGAAGCCG GCGCTAAAAA GGAATGGTTT
CAGCATAAAC TCATGACCAG CATCGCCGGT TACAGGATCC TCAAGAATAA CCTGCTGGTA
TCTGACCTGG AACATCCTGG TTTCAGAAGA CAAATCGGGC AGGTAACGAG TACCGGCGCA
GAACTTGATA TCACCGGCCG TATTGCTGAC CGGCTGTCGA TATCAGCCAA TTATTCCTAT
ACACACGCTA TCGTCAGCAA AGACAGCAGG AAAGAGAATG AAGGAAATAA ACTGGCTTTT
ACACCCGAAC AGGTCATCAA CAGCTGGATA CAATATGGCA TCCCATTAAA AGCAGGATCC
CGCCTGAGCC TGAGCCTGGG CCACAATACA GTGACCAAAA CAGCCACTTA TACACCCGGT
TTCGATCTCA AAGGTTATAC AAAGTTTGAT GGCGGTATCG CATATACACA TGGCAAATGG
TATCTGCGTG TCGTAGCCGA CAACCTGACC AACAAACGTT ATTTCTCCAG CGGCGATATG
CTGGTAGGAT CCGTCTATGA AGGGGTAAAG ACCTACTACT ACATAGAAGG CGCCCCCATA
TCGTTCAAAG CATTCGCAGG TATCAGACTA TAA
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| Protein sequence | MKKSLPIPFS LCLLAISAQA QQKTDSLRKQ HLKEIEIMEK KKNMRTDSMS PVLRMEGRML
EIPQNITGVT ADLIREQGGL EMKDIIRNAS GVKIGYNSSV FDASATVMMR GFYTDTYVNG
MPQRSTMGAL TDDAAFIERV DFVKGPAGFL ISSGDPGGSV NITTKTPRQQ RVRQLELSGG
SFGFLRGSLD LGSAVKEKGF SYRLNGAYQQ QQSFLDFLKT RKYVASPVIQ YNFSRRTSLL
AEYNFIHMLS DGGSSVTKIG TESEVLKDRI GNNYAGDPNL PQSGSKSQSI RLAFEHRFND
HLRLTIQSKY TVNSTAVWYL ISDNYSLINF DSTNITRRLP VNNSITGRVA AVQAYLSGNL
KTGQHITHNF VAGLDYNYSK DNYVNAYGQY AFTFDRTHPQ YGLHPDSVKM LGKPALIVRE
NNWTSAFAYN TTRIHTNWLF NYGGRLTINT PVTTNPRQPQ KDETAFSPRL GITRLLNNNM
AVYALYDQSF IPQSGVNANG QRFDPQRGNS LEAGAKKEWF QHKLMTSIAG YRILKNNLLV
SDLEHPGFRR QIGQVTSTGA ELDITGRIAD RLSISANYSY THAIVSKDSR KENEGNKLAF
TPEQVINSWI QYGIPLKAGS RLSLSLGHNT VTKTATYTPG FDLKGYTKFD GGIAYTHGKW
YLRVVADNLT NKRYFSSGDM LVGSVYEGVK TYYYIEGAPI SFKAFAGIRL
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