| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5307 |
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| Symbol | |
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| ID | 8361484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6778452 |
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| End bp | 6779726 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644967455 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003124939 |
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| Protein GI | 256424286 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.535267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.123974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGA CATCCAACGA AACTATACAG TTCAGTTCTT ATCAAAAACT TATCATCTTC
ATGCTTGCAG TTGCTCAGTT CTCTGTACTG CTTGACTTCA TGGTAATTGC TCCTTTAGGT
GATTTATTAA TTAAATCTTT ATCGCTTAAA CCAGCACAGT TCGGGATTGC AGTATCTGCT
TATGCATTTA GTGCGGGAAT ATCGGGATTA TTAATTGCAG GTTTCGCGGA CAGATACGAC
CGTAAAAAAT TATTACTCTT TTTTTATGCA GGTTTTATAT TAGGAACATT ATGTTGTGCA
ATCGCATCCT CTTATATTTA TCTAGTTGCC GCACGTATTG TTACAGGTCT GTTCGGTGGT
GTGATCAGCT CTATTGCAAT GGCCATCATA GCCGACATTT TCCCCCTGCA ACAGCGGGGC
AGAGTAATGG GCTATCTGCA ACTGGGCTTT AGCGCCAGCC AGGTACTAGG CATTCCTCTC
AGTTTATTAA TAGCGAATCT ATGGGGATGG CAATATCCAT TTGTACTGGT ATCTGCAATA
GGACTGATAG GGCTAATAAT GATCGCTACC AGGCTGCAGC CATTACAGCA ACACCTGCAT
ATACAACAAA CACGTTCTCC GCTTTTACAT CTCAAACATG CACTCTCTAT CGGTCGCTAC
CATATTGGCT ATATCGCTAC TGCCCTCATG TCAATCGGTG GTTTCATGAT GATGCCCTTC
AGCAGCTCTT TCGCTGTAAA TAATCTGCAT GTAACCCAAA CACAGCTGCC CGGATTATTC
ATGGCATCAG GTATCACTAC CCTCGTCGTA ATGCCATTAA TAGGCAAACT GAGTGATAAA
ATGGACAAGT TTAAATTATT CACACTTGCC TCCATACTCA TGATGGCGAT AGTCGTGATC
TATACCAATC TCGGACCGAC TCCCTTCTGG ATTGTTGTGG CACTGAATAT GCTGATGATG
TCTAGTATTA TGAGCAGAAT GATTCCGAGC AGTGCGTTAA CCAGCGCAAT CCCGGAGCCA
CAGGACAGGG GTGCGTATAT GAGTGTCACG GCTTCCCTTC AGCAAATAGC CGGCGGTATC
GCAGCAGCAG TTGCCGGTAT TATCGTAACA CAGAAAGACA AGTTACAGCC CCTGGAACAT
TATAACATCG TAGGTTATAT GATGGTAGTC ATCACTGTCT TCTGTATATA TCTCGTTCAC
AGGATCAATA AAATGATCAT TGAAAAAAAC ACCAATACCC AGAAAGCAAA TAAACCCAGT
GTATACCCTG CCTGA
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| Protein sequence | MTKTSNETIQ FSSYQKLIIF MLAVAQFSVL LDFMVIAPLG DLLIKSLSLK PAQFGIAVSA
YAFSAGISGL LIAGFADRYD RKKLLLFFYA GFILGTLCCA IASSYIYLVA ARIVTGLFGG
VISSIAMAII ADIFPLQQRG RVMGYLQLGF SASQVLGIPL SLLIANLWGW QYPFVLVSAI
GLIGLIMIAT RLQPLQQHLH IQQTRSPLLH LKHALSIGRY HIGYIATALM SIGGFMMMPF
SSSFAVNNLH VTQTQLPGLF MASGITTLVV MPLIGKLSDK MDKFKLFTLA SILMMAIVVI
YTNLGPTPFW IVVALNMLMM SSIMSRMIPS SALTSAIPEP QDRGAYMSVT ASLQQIAGGI
AAAVAGIIVT QKDKLQPLEH YNIVGYMMVV ITVFCIYLVH RINKMIIEKN TNTQKANKPS
VYPA
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