| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5277 |
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| Symbol | |
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| ID | 8361454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6689980 |
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| End bp | 6691482 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967425 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124909 |
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| Protein GI | 256424256 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000791163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.051402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAG TTATATATAA ATTCTCCGCT GTCGTATTGA TGGGTAGCCT GCTTTTCTCA
TCCTGTACGA AAGACTTTAC AGAGATCAAT ACTGACCCGA ACGGTACACC TACCGCATTA
CCGGAACAGC TGATGGCGCC TGCACTGGTA GGTACGCTAG GCTACAACAT GCTGCGTAAC
CGTAACTTCA ACAATGAACT GATGCAGGTG ACAGTGGATG CGAGTGATGC AGAAGGTAAA
GTATTCAGAT ATGATTATCG TGCCACCTGG GCTGATTACC TGTATAATGG CCTGTATTCT
GAACTGACCA ACTTTAAGGA TATGTACAAG GTGGCTAATC AGCAGCTGAC CTTCAACAAG
TCTTATAAAG GTATTTCTGT TATCTGTCAG TCATGGATCT ATTCCATACT GACAGATACC
TACGGAGACA TTCCATATTC TCAATCCAAC GAAGCAAGAG ACAGCGCTAT CTATGAGCCG
GCTTTTGATG CACAGAAGGA TATCTATATG GACATCTTCG ATAAACTGGA TTCTGCAAAT
ACCTGGTTAT CTGCAGGTAC GGCTATCAGT GCCAACAGCG ATCCTGTGTA TGGCGGCGCT
GTCGCTAACT GGCGTAAGTT TGGTAACTCA CTGTATTTAC GTTTACTGCT GAGGGTATCC
GGTAAGCCCG AAATGACGGA ATTCTGTAAG GCCAGAATTA AGAAAGTGGT GGAGACTTAT
CCGATTATGG CCAGCAATGC GGAATCAGCT ATCCTGAGAT GGACGGGTGT GGGCCCGCTG
AGTTCTCCTT ACATCGGTGT AAGAGAACAG GACTTCAGAG CGCCTGGTAT TGCCAGCTAT
TTCATTGACA ACCTGAGTTC CTGGAATGAC CCGCGTATCG ATATTCCTAC CTATGGTACC
AGCAGTATCA ACAGATGGGG TATTGCGCCG TACTCCGGTT CTTACCAGGG TATTCCGAGT
GGTTATGCAC CAGGTGAGAA CCCGGTAAAG AAATGCTACT TCTACTCCAA TACTTCTGCG
GTATCACTGA TGACAGAGCC AATGACGGGT ATGATGATGA ACTATGCGGA ACTGAAGTTC
ATACTGGCAG AATGTGCGAT CAGGGGATGG ATCACCGGTT CTGCTGAAAC CTATTACAAT
GATGGTGCGC AGAACAGTAT CACGTTGTGG CTGCCTAACT GGACTGTCCC TATCAAGGAT
TTCCTGACAG CGGCAGATAT CGAGTGGGAT GAAAAGTTGT CATTCGATGA TAAAATGGAA
AGGATCCACA AGCAGAAATA TTATGCGCTG TTCCTGACAG ATATGCAGCA GTGGTTTGAA
TACCGTCGTA CCGGTCACCC GATCCTGCCT AAAGGCGCGG GACTGAAAAA CGGGGGTGTG
ATGCCTGCAA GGATGACTTA TCCTGTATAT GTACAATCCA CTAATCCGAC AAATTATAAA
CTGGCAGTTG CCAGACAGGG GGCAGATCAG ATCTCTACCC AGGTTTGGTG GCAAAAACCA
TAA
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| Protein sequence | MKKVIYKFSA VVLMGSLLFS SCTKDFTEIN TDPNGTPTAL PEQLMAPALV GTLGYNMLRN
RNFNNELMQV TVDASDAEGK VFRYDYRATW ADYLYNGLYS ELTNFKDMYK VANQQLTFNK
SYKGISVICQ SWIYSILTDT YGDIPYSQSN EARDSAIYEP AFDAQKDIYM DIFDKLDSAN
TWLSAGTAIS ANSDPVYGGA VANWRKFGNS LYLRLLLRVS GKPEMTEFCK ARIKKVVETY
PIMASNAESA ILRWTGVGPL SSPYIGVREQ DFRAPGIASY FIDNLSSWND PRIDIPTYGT
SSINRWGIAP YSGSYQGIPS GYAPGENPVK KCYFYSNTSA VSLMTEPMTG MMMNYAELKF
ILAECAIRGW ITGSAETYYN DGAQNSITLW LPNWTVPIKD FLTAADIEWD EKLSFDDKME
RIHKQKYYAL FLTDMQQWFE YRRTGHPILP KGAGLKNGGV MPARMTYPVY VQSTNPTNYK
LAVARQGADQ ISTQVWWQKP
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