| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5221 |
|---|
| Symbol | |
|---|
| ID | 8361398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 6596557 |
|---|
| End bp | 6597741 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644967369 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003124853 |
|---|
| Protein GI | 256424200 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACA ATACCCATCG CGACAACTGG ATCGACTATC TCCGCAGCTC CATTACGGTG
CTGGTAGTCG CCCATCACTG CTCACTCGCC TATACCACCT TCGCTTCTTT CGATGCGAAT
GCCTACATCA ATTCCACTCA CCCGGTTGTA GACGCCCAAA GATGGATAGG ACTGGATATC
TTTGAAAACT TCAACGATAT CTTTTTTATG TCGCTGATGT TTTTCATCGG CGGATTATTC
CTCACCAAAA GTATTACGAA GAAAGGCACC GCTGCCTTCC TCAAAGACCG TTTCTTCCGC
CTGTTCCTGC CCTTTCTGTT TGGCGTAAGC GTACTCATGT TATTGGCTTA TTTCCCGGCC
TACTATCTGG CACATCATGA GCTGAACATT CCGGCCTACA TAAAAGACTT CTTTACCACT
GAACAATGGC CGGTAGGTCC ACCCTGGTTT ATCTGGGTCC TGTTTGCCTT CAATACTATC
TTCGGCGTCA GCTGGTGGTT GTTTAAAAAC GCATACATCC GCGGGGGCAA AGCCATTCAA
CGACTGGCCA ATCGCCCTTT CCTGTTTTTC GGATTATTCA TCGGCATCAC CTGGATTACC
TACGTACCAT TAACCGCCGC TATCGGTGCA GGTACCTGGA CCGGCATAGG GCCATTCGAT
TTCCAATTAA ACCGCATCCT GCTCTACTTT GCCTACTTCA TCCTCGGTGT AATCACTGGT
AGTGGGGACT TCCAACAGTC GCTCTTCTCC CGTGATGCAG TACTGACCCG TTACTGGAAA
GTATGGTGTG TACTGGCACT GATCGCCTAT ACCCTGATCA CACTCAATGG CATTTATGAG
CCATTGCGCA ATATGGTGAT AAAAGGAATG TTAGCGCCAC TGGCTGCCTG GATGATCTAC
TTTACCGTAT ATGTATCTTC CTGCACACTG AGCTGTATTG CTTTCCTGAC CACCTTCAGG
GCAAAGATCA ATCACACACG TCCATGGATG GATTCCCTGA CAGCCAATGC TTATATGATC
TATCTCGTAC ACTATATTTT CGTGCTCTGG ACACAGTTTC TTTTGCTGCC ATTAGACGCA
CCCGCAGGAG TGAAATTCCT GCTGTCCTTC TCCGGTACGC TGATATTGAG CTGGGGACTA
AGTATCCTTC TGCGTAAAAT AAAGATCATA CGGCAATACA TATAA
|
|---|
| Protein sequence | MLNNTHRDNW IDYLRSSITV LVVAHHCSLA YTTFASFDAN AYINSTHPVV DAQRWIGLDI
FENFNDIFFM SLMFFIGGLF LTKSITKKGT AAFLKDRFFR LFLPFLFGVS VLMLLAYFPA
YYLAHHELNI PAYIKDFFTT EQWPVGPPWF IWVLFAFNTI FGVSWWLFKN AYIRGGKAIQ
RLANRPFLFF GLFIGITWIT YVPLTAAIGA GTWTGIGPFD FQLNRILLYF AYFILGVITG
SGDFQQSLFS RDAVLTRYWK VWCVLALIAY TLITLNGIYE PLRNMVIKGM LAPLAAWMIY
FTVYVSSCTL SCIAFLTTFR AKINHTRPWM DSLTANAYMI YLVHYIFVLW TQFLLLPLDA
PAGVKFLLSF SGTLILSWGL SILLRKIKII RQYI
|
|---|
| |