Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5192 |
Symbol | |
ID | 8361369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6555998 |
End bp | 6557623 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644967340 |
Product | hypothetical protein |
Protein accession | YP_003124824 |
Protein GI | 256424171 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.866766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.107608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATA ATGAAGTGTA TCTGAAACCC AATGTGGTAT TTGAACCATT GGTCGACAGG TGGTATGCCT GGAGCCATTT AATCTCCCCC GCTACAGCCG CAATGAACAT AGCTGGACGA CATATGACTA TTATGGAGTC TTATCTTATG GCCCCCAGTA TTCACGCAGA GGCGGTGCTT AATCCCAAAA TGAGAGGAGG TCCTTTCATG GATTTTAACG GTGGTCGTAC TACTGAGGTA GAAGCACTGG TACAGCATAC AAAAAAGGAG AGGAGGCAGA TGATCGAATT TGTAGAGGCT GTAAAACAGC TTGACAAAAT GTTGATCCAG GAAGCAAAGG GTTTTGGAAT GGAGGAGCTG TATGTAAAGG TGCCAGATGC CCTAAAGGGA TATGTGGAAC TGTTTTATGA CAGAAATAAC AATCCAGGGT TCAGGCTTTT TGAATCTCTT TTGTATAAGA GCCGGTTTTA CAATAAATCC TCACAGAGCC TTGCATTATG GCTGACGAAT AATGACCATC GTCCATTTGT ATTAAGCACG CCACGCCTGG AAGAGCCTAA TGTGTTGCAT CTGGAAATAC CATTTGATCA TAAAGGCATT GATCAGCTAG CCAGGATGAA AAGGATTCCT CAGCCACTGG GCCCGATTAA AGAATTGCTG GGTATTACTC CGGCACAGGA ACCTTTGTTT GGAACATTAT TCACTGAGAC GCCGCACCCT GCTTATGATA AATATACAGG TGATAAGATC AGGATGAGGT ATTTCGGTCA CGCATGTATT CTTGTAGAAA CGAAAGATGT ATGCATATTA GCGGATCCAT TGATCAGTTA CTATGGATAT CATTCTGATA TAGAACATTT CTCGGATTCT GATCTTCCTG ATGTGATCGA TTATGTGCTT ATAACGCACA ATCATCAGGA TCATATATTA TTTGAGACAT TGTTGCCACT CAGACATAAA ATAAAGAATA TCATTGTTCC AAGAACAAAA GGCGGCCGCT TGGAAGATCC GGATCTCAAA TTGATGTTTA ACAATATCGG ATTTGAAAAT GTCTATGAGA TTGACGAACT GGAAACTATT CCTTTTGGAG ATGCTTCCAT TACAGGTATT CCTTTTACCG GAGAACATAG TGATCTGAAC ATTCAGGCCA AAAGCTGCCA TCTGGTACAG ATCGGAGGTT TCAGGCTGCT TTTTATGGCG GATTCAAGAA TCATGGAACC CGCGTTATAT TCACACATTC ACGATGTGAT AGGAGATGTC GATGTAATAT TTTTGGGTAT GGAATGTGAT GGTGCTCCTT TAACATGGTT ATATGGCCCG TTACTAACCA AAAAGGTTTC CAGGGAGCAG GATGGTACGA GAAGGCTGAA TGGTTCCGAT TGTGCTAGAG GTATGTCACT GGTGGATATA TTTAATCCGA AAGAGGTGTA TGTATATGCA ATGGGTCAGG AACCATGGGT AGAGTTTATC AGTAGTATTA AATACACAGA TGAGTCCAAC CCAATTATTC AGTCTGACAG ATTGGTAAAT CTGTGTAGAG AGCGGGGTAT AATTGCGGAA AGACTCTATG GCGAAAAGGA GATCTTATAT AACAGAAAGT CAGAGCGTGT TTTAGATGTT TATTAG
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Protein sequence | MKYNEVYLKP NVVFEPLVDR WYAWSHLISP ATAAMNIAGR HMTIMESYLM APSIHAEAVL NPKMRGGPFM DFNGGRTTEV EALVQHTKKE RRQMIEFVEA VKQLDKMLIQ EAKGFGMEEL YVKVPDALKG YVELFYDRNN NPGFRLFESL LYKSRFYNKS SQSLALWLTN NDHRPFVLST PRLEEPNVLH LEIPFDHKGI DQLARMKRIP QPLGPIKELL GITPAQEPLF GTLFTETPHP AYDKYTGDKI RMRYFGHACI LVETKDVCIL ADPLISYYGY HSDIEHFSDS DLPDVIDYVL ITHNHQDHIL FETLLPLRHK IKNIIVPRTK GGRLEDPDLK LMFNNIGFEN VYEIDELETI PFGDASITGI PFTGEHSDLN IQAKSCHLVQ IGGFRLLFMA DSRIMEPALY SHIHDVIGDV DVIFLGMECD GAPLTWLYGP LLTKKVSREQ DGTRRLNGSD CARGMSLVDI FNPKEVYVYA MGQEPWVEFI SSIKYTDESN PIIQSDRLVN LCRERGIIAE RLYGEKEILY NRKSERVLDV Y
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