| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5186 |
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| Symbol | |
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| ID | 8361363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6468870 |
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| End bp | 6469724 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967334 |
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| Product | Phytanoyl-CoA dioxygenase |
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| Protein accession | YP_003124818 |
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| Protein GI | 256424165 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00839073 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAATCG AACAAGCACA AATTGATCAA TACGCACAGG ACGGTTTCCT TTTGCTGGAG
AATGTTTTTA CAGGGAGCGA AACAAATCTG ATGCTGGAAG AAATGTTCAG TGTCATCCTG
AACGATTGCC CTAACAGAAT ACTGGAAAAG AATGGAATGG TCCGGTCCTT CTTTGCTCCT
GAAAACTTTA GTTCCATGTT TAAAGATGTG TTATCGCTCA GGCGACTGGT GGAACCTTCC
GAACAGCTGA TCGGCGGACC GGTATATGTA CATCAGACAA AATTAAATAC GAAGTCTGCG
ATGGTAGGCG ATTGGTGGGA ATGGCACCAG GATTACACAT TCTGGAAGCG TGATGATGGT
ATGCCTGCAC CGGATGTACT TACTGCGATG ATCTTCCTGA ACGATGTAAC AGAATTTAAT
GCACCCCTGC TCGTCATCCC CGGATCACAT GATGCGGGTA CAATTGAAGT AGATGAAGAA
GTGGACATTG CGGGCGATAC AGATAAATGG TTCAGAGAAT ATCGTAAAAG TACCTCCTAT
ATGTCGGCCC TGACCACAGA TCTTAAATAT ACACTGGAAA AGAAAACAAT ACTCAAATGG
GCGGTAAATA AGGGTATCAC ATCAGTAAAA GGGCGTGCAG GATCTGTATT GTTCTTCCAC
GGTAATATCT TCCACGCTTC CGCCAATAAT CTTTCGCCCT GGGACCGGCA TACTTTCCTC
ATTACCTATA ACAGTATGAA CAACACCCTG CCTGACATGG CTTCTCCCCG TCCGTCTTTT
ATAGCCAGCC GCTCGTTCAT ACCTGTCGCT GCAACAGAAG ATGATATTAT ACTGAATAAA
TATGCCTCAA AATAA
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| Protein sequence | MRIEQAQIDQ YAQDGFLLLE NVFTGSETNL MLEEMFSVIL NDCPNRILEK NGMVRSFFAP
ENFSSMFKDV LSLRRLVEPS EQLIGGPVYV HQTKLNTKSA MVGDWWEWHQ DYTFWKRDDG
MPAPDVLTAM IFLNDVTEFN APLLVIPGSH DAGTIEVDEE VDIAGDTDKW FREYRKSTSY
MSALTTDLKY TLEKKTILKW AVNKGITSVK GRAGSVLFFH GNIFHASANN LSPWDRHTFL
ITYNSMNNTL PDMASPRPSF IASRSFIPVA ATEDDIILNK YASK
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