Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5168 |
Symbol | |
ID | 8361345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6448015 |
End bp | 6448458 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644967316 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_003124800 |
Protein GI | 256424147 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.293289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00537558 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGAGT CCTTTTCCAA AAAAGAGTTA AGAAATAAAA AAGCTAAGGC TAAACAAGAC AAGGCCCAGA GAAAAGAGGA GCGCAAAGCC AACAATAATA AAGGCAAGTC GCTGGAAGAT ATGCTGGCTT ACGTAGACGA AAATGGTAAT CTCAGCCCGG TTCCGCCAAG TGGCAACGCA GGAGAGATCG CTTTGAGTGA CATTAATATC GGTGCAACTC CCCGACCGGA GGAGGATCCC ACCAGAACAG GAGTAGTTTC TTTCTTTAAC CTTTCCAAAG GATTTGGATT CATCAATGAT GATAGTTCGA AAGAGAGCGT ATTCTTTCAT ATGAACCAGT TAGCGCATCC TGTAAAGGAG AAAGACAGAG TTTCTTTCCT GCGTGAGAAA GGTCCACGTG GATTTAACGC GATCAACGTT ACGAAGATCA CCTCCGCTAA ATAG
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Protein sequence | MSESFSKKEL RNKKAKAKQD KAQRKEERKA NNNKGKSLED MLAYVDENGN LSPVPPSGNA GEIALSDINI GATPRPEEDP TRTGVVSFFN LSKGFGFIND DSSKESVFFH MNQLAHPVKE KDRVSFLREK GPRGFNAINV TKITSAK
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