| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5158 |
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| Symbol | |
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| ID | 8361335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6438279 |
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| End bp | 6439046 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967307 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003124791 |
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| Protein GI | 256424138 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00149525 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000111139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCTTGACA TGAAAAATAA TTCCCATTCA GGTCTCCTGA CAAAGAACAA GTTGGACGAA
AGCCCGGAAA GCAGCCAACA GGGCCAGCAC TACATAGAAG TGGTGAAGGC TTTTGCCCGG
CTCACCTACG AGAGCGTATA TGTGATTGAT TATACGGATA TGTCTTTTGA GTATGTCTCG
GACAATCCCT TGTTCCTGTG CGGACTCTCA GCGGAAGAAG TGTTAGGGCT GGGGTATGAG
TTTTATTTCC GGCATGTGCC CGAAAACGAC CTGACATTGC TGACCCAGAT CAATGAGGCA
GGATTTGATT TTTATGCCAA CATACCGTTT GCGGAAAGAA AAGACTACAG CATTACCTAT
GATTTTCACC TGGTTAATAA AGAAGGGAAG CATATCCTGG TCAACCATAA GCTGACGCCG
CTCTTTCTAA GCCCTGAAGG AAAGATGTGG AAGGCCATGT GTATTGTATC ACTCTCACAT
CACCAGTCCG CAGGCAATAC ACGTATCTAT AAGCAGAATT CCGGCGAGAC ATGGGAACTA
CATCCCGGTG CTAAAACCTG GCGTAAATCA GAAAAGCCTG TACTCACGGA AAGGGAAGTA
GAAGTGTTGC GGCTCCATGC CCAGGGACTC AATATTAACC AGATAGCAGA AAGGATCTTT
GTGGCGCCTG ATACCGTTAA ATATTACCGG CGCCGGATCT TTGAACGGCT GGAAGTCAGC
AATATTGTAG AGGCATTGGC CTATGCGGTT AATGCCAAGC TGATTTAG
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| Protein sequence | MLDMKNNSHS GLLTKNKLDE SPESSQQGQH YIEVVKAFAR LTYESVYVID YTDMSFEYVS
DNPLFLCGLS AEEVLGLGYE FYFRHVPEND LTLLTQINEA GFDFYANIPF AERKDYSITY
DFHLVNKEGK HILVNHKLTP LFLSPEGKMW KAMCIVSLSH HQSAGNTRIY KQNSGETWEL
HPGAKTWRKS EKPVLTEREV EVLRLHAQGL NINQIAERIF VAPDTVKYYR RRIFERLEVS
NIVEALAYAV NAKLI
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