Gene Cpin_5095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5095 
Symbol 
ID8361271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand- 
Start bp6356998 
End bp6357600 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID644967243 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003124728 
Protein GI256424075 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.666558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.638711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTC AAGATAAAAA ATCGCGACTG AAAGAAGAGA TCCGTGCCAG TATACTGGAC 
GCTGCATTCA CGCTGGCAAA AGAAAATGGC TGGGAAGCTG TCAGCATGAG GAAAATAGCT 
ACAATGATCG CGCATACCGC GCCGGTTATA TATGACTATT TTCAGAATAA AGAAGCCATT 
ATGAGAGAAC TCGCCCGCGC TGGCTTCAGA TTATTGGCCA CTGCTACCAC CGCCGCACAG 
CAGGAACAGG AACAACCGGA ACAGCAACTG CAATCAATGT GGATGGCTTA CCTGCATTTT 
GCGCAAACCG AAAAGGAATA TTACCAGCTG ATGTTTGGGA TGGGTATTCC ACTGAGCGCA 
GACAATAGCT CTTCTCCGGA AATTGACATA TTTGCCGGAC TGGTACAGGA CGTGATCAGA 
CAAACGGCCA ACGGAGAGAT CATTTCTACA GAGGAAATTG CCCGCAGGTA TTTCCTTCAG 
TGGTCAGTCG TACATGGTCT TATCGGACTG GGACGCATTT ACAAAGAGAA TACCGATGCA 
TTCAACGAGA GAGTAGTGCT GGATATGCTC AGACAAACTG CAACCGTCGC CTCAGCCGCA 
TAA
 
Protein sequence
MEAQDKKSRL KEEIRASILD AAFTLAKENG WEAVSMRKIA TMIAHTAPVI YDYFQNKEAI 
MRELARAGFR LLATATTAAQ QEQEQPEQQL QSMWMAYLHF AQTEKEYYQL MFGMGIPLSA 
DNSSSPEIDI FAGLVQDVIR QTANGEIIST EEIARRYFLQ WSVVHGLIGL GRIYKENTDA 
FNERVVLDML RQTATVASAA