| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5092 |
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| Symbol | |
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| ID | 8361268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6340114 |
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| End bp | 6343080 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967240 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124725 |
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| Protein GI | 256424072 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.303703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CACGCTTTGC CCGGTATGCA TTTCTGCTGT GCTTTGTGTT GATCTCTCTG
TTTACCTATG CGCAATCAGG CAGTATTAGT GGGAAGGTGA CAGACGATGC AGGACAACCA
ATTCCAGGCG CCACCGTCTT CATCAAAGGG ACCAGTAAGA ACGCCACAGC TGATGCGGAA
GGTAAATTCA CCATCACGGG CATTACGCCT GGAAACATCG TAGTAGTAGC CCGTATCATG
GGGTATGAAA CATTCGAAAT GCCTGTTAAT GCAGGCAACA GCACAGAATC TATCACTTTC
CAGCTGAAAG CTGACACCAA AGGTCTGAAC GAAATAGTAG TAGTAGGTTA CGGTACCCAG
AAAAAGAGTG ACCTGACAGG TGCGATCGCT GTTGTTTCTT CCAAAGACTT TAACAAAGGA
CCTATCAGCT CTGCTGATCA GCTGATCACT GGTAAAGTAC CTGGTGTACA GATCACCTCC
AATGGTGGTG CACCTGGCGC TGGTAGTACC ATCCGCGTAC GTGGTGGCGC TTCCCTGAAC
GCTACCAATG ATCCGCTGAT CATCATAGAC GGCGTACCTG TTGACAACAA CAATATCAGC
GGTGCTTCTA ATGCACTCGC CCTGATCAAT CCAAATGATA TTGAATCATT TAACGTACTG
AAAGATGCAT CTGCAACCGC TATCTACGGT TCCCGTGCCT CCAATGGTGT CATCATCATT
ACCACTAAAA AGGGACGTCT GGGTGATCAG CTCCATGTTT CTTTCAGTTC AACGAATGCC
ATTTCCAAAG TAACCAGCTT CTCTCCGGTA CTGAATGCCA GCCAGTTCTC TGATGTTGTA
AAACAGAACG GTACTGCTGC ACAGATCGCA CTGCTGGGTA CTGATAATAC TGACTGGCAG
AAACAGATCT ACCAGTCCGC TTTCAGCACC GATAACAACC TGGCCCTCAG CGGATCCTGG
AAGAAACTGC CTTACCGCAT TTCTGTTGGT TACCTGAACC AGGACGGTAT CCTGAAAACA
TCCAACCTGG AAAGAAACTC AGCTTCCATT AACCTGTCTC CAAGTTTATT TGATGATCAC
CTGAAAATCA ACATGAATGT AAAGGGTTCT ATTGCTGATT ACCGTTTTGC GGACCAGGGA
GCCATTAATG CCGCTATCGC ATACGATCCG ACCAAACCTT TGCGCTCCGG CAACAGCAAT
GACTTTGGGG GTTACTACGA ATGGCTGTAC AACGGCAAAC TGTACGACCT CGCTACTAAA
AACCCGGCGG CGATGCTGGA ACAGAAAATG GACAAATCCC AGGTAAAAAG GAGCATCGGT
AACATCCAGT TTGACTATAA ATTTCACTTT CTCCCTGAAC TGCGTGCTAA CCTGAATCTG
GGTTACGACT ATCAGAAAGG TGATGGTAAT ACAAACATTC CGAAGTATGC AGCACTGTCC
TACTACAATG GTACCGGTGG TTCTTACAAG CACTACTCCC AGGAAATGAA GAACAAACTG
TTTGACTTCT ACCTGAACTA TGTAAAAGAG CTGAAAGGTA TTAAAAGCCG TATTGATGTA
ATGGGTGGTT ATTCTTACCA GGATTTTATC ACTGCTACTC CTGGTTATCC TACTCTGGAT
GAATCCGGCG ATACCACCAC CGCTGCGGGT AACTACAGCG AAGCACAGCA CACACTGGTA
TCTTTCTTCG GTCGTCTGAA CTATACTTTC AATGATAAAT ATCTCCTCAC TTTCACCATG
CGTCGTGACG GTACTTCCCG TTTCCGCCAG CACTGGGGTA ACTTCCCTTC GGTAGCATTC
GCGTGGAAAC TGAAGGACGA GCCTTTCCTG AAGAATACAA AGACTTTATC TGATCTGAAA
CTGAGACTCG GTTACGGTGT GACTGGTCAG GAAAATATTG GTGTGGGTAA AGAATATGCA
GCATTGTCCC GCTACACTTA CGGCGATGCG AACTCCTCTT ACCAGTTGGG TGATGTGTTC
TACAAAACAC TGCGTGCCGC CGGTTATGAC CAGAACATCA AATGGGAACA GACAGCTACT
TATAACGTAG CGGTAGACTA CGGTTTCCTG GATAATAAGA TCACCGGTAG CGTAGACTTT
TACTACAAGA AAACCACCGA CCTGCTGGCA GATGTAACGG CTCCTACTGG TACCAATCTG
ACCAACACGC TGTATACCAA TATCGGTAGT CTGGAAAACA GGGGCGTGGA ATTCATTATC
AATGCTACGC CAGTAGAAAC AAAAGACTTC CGTTGGGACG CTGGTTTCAA CATTACCTAT
AACAAAAACA AGATCCTGTC GCTTTCCAAA GCACAGACAG ATACTTCTGT AGGCATCGCA
ACAGGTGGTA TCAGCGGTGG TACCGGTAAC ACGATTCAGA TCAATACTGC CGGGAACCAG
ATCAATTCCT TCTATGTATA CAAACAGATC TACGATAAAG CCGGTAATCC GATCGAAGGG
GTGTATGAAG ATACCAACGG CGATGGCGTC GTGGATGCGG ATGATAAATA TCGCTACAAA
TCATCCAATC CGGTGGTATA CCTGAACTTT AATTCAAGTT TCAACTATAA GAAATGGACC
CTTGGTTTCA GTATGCGTAG CAACATCGGT AACTACATCT ACAACAACCA GGCATCCAAC
AACGGTTCTT ACAAAACATT CCAGAATAGT AACTACCTGG CCAACCTGTC TACCAGCGTA
CTGAAAACTA AATTCAGAAA CACGCAGTAC TGGTCCGATT ACTATGTAGA AAACGGTTCG
TTCCTGCGTA TGGACTACCT GAACCTGGGT TACGATTTCG GAAGAGTGAT CAGTAAAAAA
GTAGGTCTGC GCGCCAACTT CAACGTACAG AACGTATTTG TGATTACTAA ATACAGCGGT
CAGGATCCTG AGGTGTTCAG TGGTATAGAT GATAAATTCT ATCCTCGTCC GCGTGTATAT
TCTTTGGGTG TTAACCTTGA TTTTTAA
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| Protein sequence | MKKTRFARYA FLLCFVLISL FTYAQSGSIS GKVTDDAGQP IPGATVFIKG TSKNATADAE
GKFTITGITP GNIVVVARIM GYETFEMPVN AGNSTESITF QLKADTKGLN EIVVVGYGTQ
KKSDLTGAIA VVSSKDFNKG PISSADQLIT GKVPGVQITS NGGAPGAGST IRVRGGASLN
ATNDPLIIID GVPVDNNNIS GASNALALIN PNDIESFNVL KDASATAIYG SRASNGVIII
TTKKGRLGDQ LHVSFSSTNA ISKVTSFSPV LNASQFSDVV KQNGTAAQIA LLGTDNTDWQ
KQIYQSAFST DNNLALSGSW KKLPYRISVG YLNQDGILKT SNLERNSASI NLSPSLFDDH
LKINMNVKGS IADYRFADQG AINAAIAYDP TKPLRSGNSN DFGGYYEWLY NGKLYDLATK
NPAAMLEQKM DKSQVKRSIG NIQFDYKFHF LPELRANLNL GYDYQKGDGN TNIPKYAALS
YYNGTGGSYK HYSQEMKNKL FDFYLNYVKE LKGIKSRIDV MGGYSYQDFI TATPGYPTLD
ESGDTTTAAG NYSEAQHTLV SFFGRLNYTF NDKYLLTFTM RRDGTSRFRQ HWGNFPSVAF
AWKLKDEPFL KNTKTLSDLK LRLGYGVTGQ ENIGVGKEYA ALSRYTYGDA NSSYQLGDVF
YKTLRAAGYD QNIKWEQTAT YNVAVDYGFL DNKITGSVDF YYKKTTDLLA DVTAPTGTNL
TNTLYTNIGS LENRGVEFII NATPVETKDF RWDAGFNITY NKNKILSLSK AQTDTSVGIA
TGGISGGTGN TIQINTAGNQ INSFYVYKQI YDKAGNPIEG VYEDTNGDGV VDADDKYRYK
SSNPVVYLNF NSSFNYKKWT LGFSMRSNIG NYIYNNQASN NGSYKTFQNS NYLANLSTSV
LKTKFRNTQY WSDYYVENGS FLRMDYLNLG YDFGRVISKK VGLRANFNVQ NVFVITKYSG
QDPEVFSGID DKFYPRPRVY SLGVNLDF
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