Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5012 |
Symbol | |
ID | 8361188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6263233 |
End bp | 6263808 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967161 |
Product | nitroreductase |
Protein accession | YP_003124646 |
Protein GI | 256423993 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0181044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00444875 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTATTA AGATTGCCAA TACACAATAC GATGTAATTG ATCTGATTAA AAACAGATGG AGCCCTCGTT CCTTCTCTAC AAAAGATATA AGTGCGGCAA CGCTTGAGAC CATCCTCGAA GCCGGTTCAT GGGCGCCAAG TGCGAACAAT ACCCAGCCCT GGAGGTTTAT ATATGCTTTA CGTGGTACAC CTGGTTTTGA CAAATTGCTG GCTACATTAG CACAGGGTAA CCAACCCTGG GCAAAAAATG CAGCCGCACT GGTAGCAACC GTGGGTATCC GTGAAACGCC TGACACCCAG CAGAAGAATC ATTACTTCAT GCACGACGTC GGTATGGCTA CCTCCTTCAT GCTGTTACAG GCACTGAACA TGGAAATATA TGCGCACGTA ATGGCAGGAT TCAATAAACA GCAGTTTGCT GAAACCGCTG GTCTGGGCGC TAACGAAGAA GCCGTATCCA TTGTAGCACT GGGTTATATC GACAGCGCGG AAAAACTGGA AGAACCTTAT AAAACAAGGG AATTAACTGC CAGAAGCCGT AATCCGATTG CAACGATCGC TGCTCACCTC GACTAA
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Protein sequence | MSIKIANTQY DVIDLIKNRW SPRSFSTKDI SAATLETILE AGSWAPSANN TQPWRFIYAL RGTPGFDKLL ATLAQGNQPW AKNAAALVAT VGIRETPDTQ QKNHYFMHDV GMATSFMLLQ ALNMEIYAHV MAGFNKQQFA ETAGLGANEE AVSIVALGYI DSAEKLEEPY KTRELTARSR NPIATIAAHL D
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