Gene Cpin_5012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5012 
Symbol 
ID8361188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6263233 
End bp6263808 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content47% 
IMG OID644967161 
Productnitroreductase 
Protein accessionYP_003124646 
Protein GI256423993 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0181044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00444875 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATTA AGATTGCCAA TACACAATAC GATGTAATTG ATCTGATTAA AAACAGATGG 
AGCCCTCGTT CCTTCTCTAC AAAAGATATA AGTGCGGCAA CGCTTGAGAC CATCCTCGAA
GCCGGTTCAT GGGCGCCAAG TGCGAACAAT ACCCAGCCCT GGAGGTTTAT ATATGCTTTA
CGTGGTACAC CTGGTTTTGA CAAATTGCTG GCTACATTAG CACAGGGTAA CCAACCCTGG
GCAAAAAATG CAGCCGCACT GGTAGCAACC GTGGGTATCC GTGAAACGCC TGACACCCAG
CAGAAGAATC ATTACTTCAT GCACGACGTC GGTATGGCTA CCTCCTTCAT GCTGTTACAG
GCACTGAACA TGGAAATATA TGCGCACGTA ATGGCAGGAT TCAATAAACA GCAGTTTGCT
GAAACCGCTG GTCTGGGCGC TAACGAAGAA GCCGTATCCA TTGTAGCACT GGGTTATATC
GACAGCGCGG AAAAACTGGA AGAACCTTAT AAAACAAGGG AATTAACTGC CAGAAGCCGT
AATCCGATTG CAACGATCGC TGCTCACCTC GACTAA
 
Protein sequence
MSIKIANTQY DVIDLIKNRW SPRSFSTKDI SAATLETILE AGSWAPSANN TQPWRFIYAL 
RGTPGFDKLL ATLAQGNQPW AKNAAALVAT VGIRETPDTQ QKNHYFMHDV GMATSFMLLQ
ALNMEIYAHV MAGFNKQQFA ETAGLGANEE AVSIVALGYI DSAEKLEEPY KTRELTARSR
NPIATIAAHL D