| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4974 |
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| Symbol | |
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| ID | 8361150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6219980 |
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| End bp | 6221890 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967123 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124608 |
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| Protein GI | 256423955 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTTA ATCCACGAAT CATGAAACGA CTTTATATAT ACTGCCTGAT GGCAACGGGA
CTGTTCCTGC TGACCAGTTG TATGAAAGAC TGGCTCGACA GAGAACCACG CACCATCCTC
TCAGACGAGC AGGTATGGAA TGATCCTAAA CAGATCGTCG CATTGCTGGC GAATTTTTAT
GACAGGATAC CTGCAGAGAG CGGGTTGACC GATGTCAATA ATGAAGGCGC CGATGGCCGG
CTTTTTCAGT GGCGTAATCT GGCGAACTAT GACGAGGGGA TGTGGAGTGG TCAATCTAAT
GAAGATGGCC GCAATAACAT CACTTCTTAT GGTTATGACA GCTGGTATCT CTGGAATTAC
ACTTACATCA GGGATATCAA CCTGGCGTTG GAAAATATCG AGAAATATGG CATAAAGCTG
TCCGATGCTT CAAAGAAACA ATATTCCGCT GAATTACGTT TCCTGCGCGC ATTGAATTAT
TTCAACCTGG TAAAACGGTT AGGCGGCGTA CCCCTTGTAA CCAAACAACT GGTGTATGAT
TATTCCGGTA ATGTGGAGAG TCTTCAGCAA CCACGTGCAA AGGAATCGGA GGTGTATGAT
TTCATTGCTT CGGAAGTAGA TGCGATTAAA GACCTGATCG GCAATGACGG TAGTACTACC
CGCGCCAACA AATACACCGC ACTTGCATTA AAGAGCAGGG CGATGTTATA TGCGGGATCA
CTGGCAAAGT ATAACGGTCT TATGGCCGCG CCTATTACCA CTGCAGGTGG AGAAGTGGGT
ATTCCCGCTG GTATGGCGAA TGGCTATTAT CAGAAAGCCC TGGATGCATC CAAAGAAATC
ATCAACAGTG GTCCTTATGC TTTGTATAAG AACAATCCGG ATCTGGGAGA AAACTTCTAT
GAAGCGGTGA CCAAGAAGGC GAATAACAGG GAAGCGATCT TTGTGAAAGA CTTCCTGTTG
CCCACCCGCA AGCATGTGTT TTCTTATGAC AATATTGCCC GTGGTATCAG AGAGGACAAC
CTGGGCTCTT CTTCTGTGGT GCCTTCGCTG AACCTGGTGG AGGCTTATGA ATACAAAGAC
GGAACAAATG GGGCGTTGAA GACACGTACT GCTGATAATA CAGACTATAT CTACTACAAC
AATGTAGCTG ATATCTTCAG CAATAAAGAT GCGCGTCTGT ATGGTACGAT TATCTATCCG
GGTACGTCGT TTAAGAGTTT GCCGGTATCT ATTCAGGCGG GCGTACTTGT ATGGAACGCG
GGTCGTAATG CCTATGATAT CGTGGAGGGC AGCGATCTGG GTACCACTTA CAGCGATGGT
AAACTGCTGA CAGGTACTTC TGGTCCGCAC CGCTCTATAC AGGAAGTATC CAATACAGGA
TTCTATCTGC GTAAGTTTAT CGATGCGAAT GATAAGACGA GTACCCGTGG CGTACAGAGT
GATGTATGGT GGGTATGGTT CCGTCTGGGA GAGATTTATC TGAACGCGGG GGAGGCGGCA
TTTGAGCTGG GACAGACAGG CAATGCGCTG CTTTATATCA ATGCACTGCG CGAAAGAGCA
GGTTTTGGGC CTAATAGTCT GACGACACTG ACGATCGATC GGATCCGCAA TGAGCGCAGG
GTAGAACTGG CGTTCGAAGA TCACCGTTTA TGGGATCTCA AACGCTGGAG AACGGCGGAT
AAGGTATGGA ATGGCAGTAC TTCCAGTCCG GATGCGATGA TCTACGCCTT GTATCCTTAT
CGTGTGATCC GTCCGGGAGA TGCTGCGAGA GACGGCAAGT ATGTATTTGT GAAGATGGTA
GCGCCCCGTT TCAGAGCACC CCGCTTTTTC CGGCTGGGGA ACTACTATAC AGCGATCAAT
CAATCTGTGC TGAACAATAA TCCGAAGATT GTAAAAAATC CATTCCATTA A
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| Protein sequence | MHLNPRIMKR LYIYCLMATG LFLLTSCMKD WLDREPRTIL SDEQVWNDPK QIVALLANFY
DRIPAESGLT DVNNEGADGR LFQWRNLANY DEGMWSGQSN EDGRNNITSY GYDSWYLWNY
TYIRDINLAL ENIEKYGIKL SDASKKQYSA ELRFLRALNY FNLVKRLGGV PLVTKQLVYD
YSGNVESLQQ PRAKESEVYD FIASEVDAIK DLIGNDGSTT RANKYTALAL KSRAMLYAGS
LAKYNGLMAA PITTAGGEVG IPAGMANGYY QKALDASKEI INSGPYALYK NNPDLGENFY
EAVTKKANNR EAIFVKDFLL PTRKHVFSYD NIARGIREDN LGSSSVVPSL NLVEAYEYKD
GTNGALKTRT ADNTDYIYYN NVADIFSNKD ARLYGTIIYP GTSFKSLPVS IQAGVLVWNA
GRNAYDIVEG SDLGTTYSDG KLLTGTSGPH RSIQEVSNTG FYLRKFIDAN DKTSTRGVQS
DVWWVWFRLG EIYLNAGEAA FELGQTGNAL LYINALRERA GFGPNSLTTL TIDRIRNERR
VELAFEDHRL WDLKRWRTAD KVWNGSTSSP DAMIYALYPY RVIRPGDAAR DGKYVFVKMV
APRFRAPRFF RLGNYYTAIN QSVLNNNPKI VKNPFH
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