Gene Cpin_4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4916 
Symbol 
ID8361092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6142579 
End bp6150531 
Gene Length7953 bp 
Protein Length2650 aa 
Translation table11 
GC content50% 
IMG OID644967065 
Producthypothetical protein 
Protein accessionYP_003124550 
Protein GI256423897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.284664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTG ACAGAACATT TACACTTGTT TGTTTTACGC TCCTTATTCT ATCACTCGGC 
CTGCCGCTTA CCGTGTGGGG TCAGACGACA AGCTGGAAGG GCACTGTGAG CACCGCATGG
GCCACTGCTG ACAACTGGAC AGCGGGGGTG CCTACCGCAT CTGTAGACGC CATTATCGGC
GATGCTGCGT TCACAGGTTC CTTCCAGCCT ACCATCAGTC TTACGACTGC TGCCAGTAGA
AACCTTACAC TTGTTACCAG TGCCAAAAAC CCGGTACTGA CCATCTCCAA AGCCATTACC
ATATCCGGTA CGCTCACTAA TGGCAGCGGC TGTACGATCT CGCACAGAGG CGTTACCGTT
ACGGTAAAAG GAGACTTCGT CAATAACGGC ACCTATACGA CCACCAGTAC CTCCTCCAAG
ATCACCATGG CAGGAATTAC ACAAAGTATC AGTGGTAGTG GGATTTCCTT CAGGAGACTG
ACCATTAACT CAGGTGCTAC TGTCACTCCT GCTGTTAACT TTTCGGTTAT TGTAGCGCTT
TCTGTCAGCG GCAACCTGGT TCCACCGGAA GGCACGACGA CACTGATATC CGGCGCCGGT
ACACTTACTG TGACCGCCAC AGGGGTATTA CATGTCAAAG GGGCGACCTT CGCTACCAAT
TATGCGCTTA CCAGTACGAC TACCCTTTCT GCCGGCAGTA CGGTAGATTA TAGCGCAACA
ACCGTCAATC AGACTGTCCG GAATGACCTC ACCTACTCTA CCCTTCGCAT CAGTGGCGCA
CTGGTGAAAA CCCTGGCGGG CAACCTTAAC GCGATGAACG CTACCACCAG CACATCGGGG
ATGATCGTTG TCAATAGTGG CATCCTGAAC CTCTCCACCT TTACGGCGAA CAGAGGCACC
ACCGTAGCCG GGGGAGCGGT CACTGTCGCG AATGGGGCAA CGCTTCGGAT TGGCGGTACA
GGTACCTTTC CGGCTAACTT TGCGTCCCGT TCGCTGGCAC TGACAAGCAC GATCGAGTAC
AACGGGCTCG CGCAGACCGT TTCCGGAGAA ACTTATGGGA ACCTGACATT ATCCAGTGCC
AGTGGCGCTG TCGTCAAAAC GATGCCTGCG ACCGCATTTA CCGTAGCTGG TAATTTCTAT
TGTACTCCTG GAGCCGGGAC CAGCGTAAGC TCCACTGCTG CATCCAATAT CATCGTCACA
GGAAACATCA CAGTCGATGC CGGTGCCACG CTTAATGGCG GTAGTTTCAC ACTGGACATC
GGCGGCAACT GGACCAACAA TGGGACTTTT TCCGGCAGCA CCGGTACCGT GAATTTTAAC
GGGCCCGGTA CGAATATCAG CGGTACAGGT ACACAGGGCT TTAATAACGT CAATATCACC
GCCACCAATA TCACTGCAAA CGCAAATACG GCTGTCACTA TCGCCGGTAA CCTGGCGACA
ACCGGTCCGG GTGTATTTAC ACATGTGTCA GGTGGTACGC TGACAATGAC AGGTACAACC
AAAACCATCT CCGGAACAAA TATCACACTG GATAACCTTA CAATATCCGG ATCTGTCAGC
AGTTCCAGCA GTATCATACT GACAGGCAAT CTTGCCGTAA GTGGCTCCTT TACCGGCACA
GGCGGATCTG TGACGATGCA GGGCGCCAGT AAAACCATTT CAGGGGCAGG TACTATTACA
TTTGGTTCAT TGATCATACC AGGATCTGTT ACTACAGCCA TCCCCTTTTT CATTGGCACT
ACACTGGATG TCAGCGGCAC ATTCAGTGCC AGCGCCGGCG CAGCTACTTT CACAGGTACC
AGTACGCTCA ATGGTACAGC CAATCTGTTC AATGTGACGC TGAATGGTAC TTCGCTTCAA
TTATCTACCA ATGCCGTACT CGGTATAGCC GGTACTTTCA CTGTTACAGC GGGTACGCTG
GACGTATCCT CTACTGCACC TAATACGGTC AACTTCAACG GTACTACTGC ACAGAATATC
AATGCCCTTA CCTACAACAA ACTATTACTC TCCGGCAACG CAGTCAAAAC AGCGGCGGGA
GCTATCACGA CCAGCTATTT TACACTGGCA ACAGGAACGA CCTTTAATGC AGGTTCCTTT
GGCCATACGG TACTGATTGA CTTTGTCAAT AGCGGCACCT TTAACGCCGG TACAAGTACG
TTCACTTTTA CAGGCAGTAA TCTATCTACC ATTACCGGCG TCACTACATT CAACGTTCTT
ACCCTGAACA AAAGCTTACA GTCGACACTG GTCAACCTGA ACAATGATGT GAATGTAGCT
ACCGTCAACA TGAATGTCGG TACCATCAAT ACCGGGACTA ACATTTTCAA CATGACGGTG
GATAGAAGTG GACCGGGGAT CATTCTGGGT AACGTACGCC GTACACAGTC CTTCGGACTA
GGCGGTATAT ACGCCTTTGA GAGCCCGAAT ACGACGCTGA GTCTTGTGGG ACTTCCATTA
ACAGGCGCCA TCACCGTTTC TGTCGCCATT GGCCCTGTAA GTGACTTCCC GCAGGGTAGT
GCCGTTAACC GCGTATATAC GGTCAGCACT GGTCTGACAG TTAGTTTGAC TACCCTCCGG
TTTCACTATG AGGATGCCGA GTTAAACGGT AACAATGAGT CCACGATGAA CCTGTGGTAC
AACAGTGGCA GCAGCTGGGT ATTCCAGGGC AGAACGGCGG GTAATACAAC ATCCAATTAT
GTAGAATATG GTGCTACGCT GGCCATCAAT GGCCGCTGGG CCTTCTCAGA TAATTCAAAC
GTAGTACGCT GGAATGGATC TGTGAGCAGC GACTGGTCTA ATGCTAACAA CTGGACAGTG
GTGCAGGGTA GCCCTTCACG TCCGCCAGGC GCGAATGATA TCGTAGAAAT TGGTACAGCA
GCATTCACCA ATCAGCCGAC GATCAACACC GCTGTAGCCG TAAAAGCAAT CTCCCTGGGT
AGTACACAGG CAGCGACGCT TACTCTTGCT TCGGGAGGTA GTCTGACCAC ACAGGGTAAT
ATTGCCGGTA AATGGTCTGC CAATGTTACC CATACGATCA ACACAGGCGC TCAGGCACTC
ACCGTAAACG GAGACCTTGC CCTCAGCGAC GGTACTACCG CACATGCGAT CAACCTGAAC
ATCGGTGCTG GAACAGTCAC TGTAGGTGGT TCTCTGACGC AATCCGGGGG CGCTAATATC
ATATTCTCCG GTGCAGGTAA TCTGAACATC GGTAGCAACT ATAGCTACAC CAATGGCACC
TTTACACCTG CCACCGGGAC TGTGAACTAT AATGGCAGCG GTGCGCAGAC GGTGGCAGGA
TTAGCCTATA ATAACCTGCA AATAGGCAAA TCAGCCGGGG ATGCATTGTT AAGCAATACA
GCCAGTGTTG CAGGAGACCT GAATATAACC GGCGGTTCCA TGACCATGAA TGCTGCCACT
ACGGTAACGG GCAATGTCAA TATATCCTCC GGTGCTACGT TGAACAGTGG GGTCATCGGA
CTAACTGTTG GCGGCAACTG GAACAATAGC GGCACCTTCT CGTCTTCCGG TGGTACGGTT
ACGTTAAATG GTACAGGTAC ACAAACCGTC TCTGCCACGA CTTTCAATAA CCTGATCATC
AGCAAAGGCG CCGGAACGGC TACGCTAACC GGCAACTGTC CGCTCAACAG TAACCTGACC
GTCAATACCG GTACGCTGAA CCTGTCTACT TTTACTGCCA ACAGGGCTTC AGCCGGCGGT
ACATTTACAC TCGCGAATGG CGCTACGTTA CAGGCAGGTG GGGCAAACAA TTTCCCTGCA
GGCTATTCTA CCTATACATT AGGCGCGACC AGTACGACCA ACTATAATGG AACCGTCGCA
CAGGCGGTTG CTGGTGTGCC GTACGGTCAT CTTATCTTCA GCAATGGCGG CACAAAAACA
CTGTCCGCTA CCTGCACCGT CAACGGAGAT CTGACCATCA ACAGCGGCGC TACTTTCAAT
GGTGCAACCT ATACCATCAA CCTCTATGGC AACTGGAACA ATAGCGGCAC CTTCGTTCCT
GCTACCAGTA CGATCACACT CAATGGCCCT ACCAAAACCA TCACAGGAAA TACTATCTTC
AATCGTCTGA CTATATATGG CAGTTATACC GTCAGCAGCA GCGACATTAC CTATAACGGT
CTGCTGACCA TAGCCACTGG TGGCTCATTC AATGCAGGTG CGGGAGTAGC TACTGTAAAT
GGTGACCTGA CCAACAATGG ATCGCTTACC AGCACCGGTA CCACTACCTT CACCGGTACC
ACCTTACAGA CGATCCGTTT TGTCAATGCA ATTACGTCTA ACTCCAGCGG CATTATCAAT
TTCAACGGCA CTGTACCGCC TGTGCTCAAC TCCACCAGTA CGCCCACCTA CGCTACACTT
AACGTCAATA ACACCGGCGG TGTTACGGCA AGCGTTGGCT GGATCGTCGG AATCGCTTTC
AACATCGGAA ATGGCGCTAC TTTCAATGGC GGTGTTTCTA CGCATAATGT GCTCGGTTCA
TTCACAAACA ATGGTACGGT GACCAGCAGC GGTACGATGA ACTTCATTCC CTCAGCGGCA
CAAACCATCA AACTGGCCGG CAACGCATTT ACCAGTACAG GGACCGTACA ATTCGGCGGT
ACCGGTGCGA TGAGTGTAAC CGGCACCCCC AATGCCCTGT CCCACGTTGT GATCTCCAAT
ACGTCCGGTG TAACCCCTGC TTCGAACTGG CCGGTCAATG GAGATTTCCA GATCACCAAC
AATGCCGTCT TCAACGCAGG TACTTATACA TATACAATAG GTGGTGACGT AGAAAGCAAT
GGTACACTGA ACGGTGGCAC CTCTCTGTTT ACCTTGACAG CAGCAGATGC ACAGTTGACA
GGTACACCGA ACACTACCTT TTATGACCTG ACGATTACGG GTACCACCAC TGCTATTTCC
GACTATAACG TCAGCCATAA CTTCACCAAT AACGGCACCT ATGATGGGAC GGTAGGCGCC
CTGACCATGA CTGGTGGCCT GCCTTCCGTC ATTACCGGTT CCGCTGCTTC ATTCAACCTG
GCACAGGTCA CTAACCAGAA AGACCCCGGC GTTACAACTA CCCTCGCTAA AGCTATCACC
GCGGTAGATG ATATCACGAT CTCGACAGGA ATACTGGATG CAGCAGGATT TGCCATCACA
CCAAGTGCGA CCGGTTCACT GACAATTGAA GACAATGCCC GCCTGATACT GCGTGGTACA
CAAACCTTAC CAGCCTTCAG TACCTACACG TTGGACACGC TCAGTACCGT AGAATATGGC
GGCAGTACAC AGGCTATCTC CTCTGCTACA CCTTATGGCA ACCTGGTCAT CTCTGCAACA
GGATCTAAAA CAGCATCTGC GGTATTAAAA ATTCTGAATG ACTTTACCTT GTCAACCGGC
ACTTTCGTAC AGGGTAGTTT TACGGACACG GTCGGCGGTA ACTGGACAAT GAGCAGTGGT
ACTTATACCA ATACCGGTTC AACGGTTTAT TTCAATGGCC TCGGTACGCA GACTATCACC
TCTACCGGTG CATTTAATAA CCTGACCGTT AATAAATCAG CGGGTATTAT CAATCTCGAA
TCTAACGTGA CAGTCAGCAG TGTCCTGAAT TTCATCCTGA ATAAGATCAA TACAGGCAGC
ACATTCGCCC TGATTCAGCC TACTACCGGT ACAGTGACCG GCGCCTCCCA ATCTACCGGC
TGGGTGATAG GCCGACTACA AAAAGCTTTT CCAACCGGTA GTGCAACCAG GAATTTTGAA
CTGGGTGATG CCACTTATTA CAGTCCTGCA TCTATCACTT TCGCCAATGT GACTACCTCT
GGCAGCATAC TGGCTACAGT CACGCCAACA GATCATCCTA ATATTGCCAC CTCTCCGGTG
AATCCTAACA GAAGCGTCAA CCGCTACTGG TCATTCACCA ATACAGGCAC TGGCTTTACC
ACTGCGTCCG TTACGATGAA CTGGAACGCA GCAGATGTAG ATGCAGGATC TAATACGGCT
AATTTCAAAG TAGGGAGCTA TAATGGCTCT GCCTGGACGA CGCCAGCAAC CGCCAGTCCG
CTACCAACCT CCATACAGGC TACTGGTCTG ACGAATTTAA GTGTGGCGCT TGCCGTCGGA
CAACTAATCG CTGATAACGT CTGGACGGGC GCTGTAAGTG TTAACTGGTT CGTGACCGGC
AACTGGTCCA ATAACCTGGT ACCTGTCAGT ACAACCAACG CAACGATCCC TACAGGTCTG
ACCAACTATC CGCTGATCAA TACGGGTACC GCAATGACCG GCAACCTGAT CATACAAACC
GGGGCTTCTG TTACCGTCAG CGGCGGTACC TTACAGATCT ACGGCGCAAT CACCAATAGC
GGTACATTTA CCGCCAGCAA CGGCAGCATC GAAATGACCG GTTCCACTTC CCAGACAATA
CCTGCAAATA CTTTTGCCGG TAATACAGTG CTCAACCTCA CAACTAACAA CGTAGCGGGT
GTAACACTAC AGGGAGCGCT CAATATTGCC GGTGTGCTGA AAGCCACCGC AGGTCTGTTC
GTGACAGGCA CCAACCTGAC TTTATTGTCC ACAGCTACCC GTACGGCGTT GATAGATGGT
AGCGGTGTCG GCTCCGTATT GGGCAGCGTC ACCATCCAGC GTTACCGTCC GAACAGCTTT
GGTTATGTAT ATCTCAGTTC GCCGTTAAAC GCAGCTACCG TGAATGAGTT TTCGGATGAT
GTGAATTTGA ATTCCAGCTT CCCGTCTTTC TATCGTTATA TAGAAAACAG GGCCTCTTCC
GGTTGGGTAT CCTACACAGC CGCTTCAGGT ATCCTTGCAT CAATGGTAGG CTATGCCGGT
AATCTGGGTA CCAGCATGTT CCCTGTCACC CTCGATATGA CTGGTACTGT AAATAACGGT
ACCATTACAG CTCCTACCCT TACCAACAAT AACCAGCCTT ATACCAAAGG CTTTAACCTG
GTAGGGAATC CTTATCCGTC GCCGGTTGAC TGGGATGCAG TCGGTGGATG GACACGCGTG
AATGTCGATA ATGCAATTTA TTACTTCAAT GCAGGTACAA CCAATCAATA TACCGGTACT
TATAGCTCTT ACATCAACGG CGTATCCAGC GATGGTGTAG CTAACAATAT CGTTCCTGCC
ATGCAGGGCT TCTTTGTACA CGTGACAAAT GGTACATTCC CGGTATCAGG TACGCTGACG
GTCAACAATA CCGCCAGGGT CAATAACCTC ACGCCTAACT TCCACAGGGA AAGACCGCTG
ACGGAACCAT TGCTGCGCCT TTGCGCGGGC TTTACAGATG AAGGATCTCC TTCCGATCCG
GCAGTGATCT ATTTCGACAA TAGCTATTCC AGAGATTTCG AACAGGACAT TGACGCCCTG
AAAATTATCA ATACAGACGA ACATGTACCT AATCTGTATG TCATGGCAGG CACAGAACGA
CAATCAATTG CCGCATGGCC CAATGACATA GATAGTACTG AAATGATCCC GCTGGGTATC
ACGACTGAAC AGGAAGGATA CGTCAGCTTT ACCATGCCAC TGATCGAGCG CATGCCGGCT
GGCAGACATT TCTACCTGTA CGATAAAGAG GCGGGCATAA CGCATGATCT GCATCAGACG
ACGCCCTACC GGCTGTTCCT GCGTAAAGGA AGTTTTGATA CCCGTTTCTT CCTGGTATTG
AAAGCAGGTG ATGATGGCGC AACCTCTGCT GAAACACCGT TTTATCATGC TTACGCGACT
GGCAATAATC TGTACGCTCA GTTTGACAAA ATACCCGGAG AGAAATGTAC GATCACAGTC
AGCAATGTAA ACGGGCAGGT ACTGTTGCGA AAAGACTATA CCGGCAATGG CCGTTATCTG
CTGGGGTCAC ATTACAACGG AGGTATTTAC GTCGTCACCT TCTACGCAAA CAAACAGCAG
GTATCGAAGA AAGTGTTTAT CGCTAACCAA TAA
 
Protein sequence
MNTDRTFTLV CFTLLILSLG LPLTVWGQTT SWKGTVSTAW ATADNWTAGV PTASVDAIIG 
DAAFTGSFQP TISLTTAASR NLTLVTSAKN PVLTISKAIT ISGTLTNGSG CTISHRGVTV
TVKGDFVNNG TYTTTSTSSK ITMAGITQSI SGSGISFRRL TINSGATVTP AVNFSVIVAL
SVSGNLVPPE GTTTLISGAG TLTVTATGVL HVKGATFATN YALTSTTTLS AGSTVDYSAT
TVNQTVRNDL TYSTLRISGA LVKTLAGNLN AMNATTSTSG MIVVNSGILN LSTFTANRGT
TVAGGAVTVA NGATLRIGGT GTFPANFASR SLALTSTIEY NGLAQTVSGE TYGNLTLSSA
SGAVVKTMPA TAFTVAGNFY CTPGAGTSVS STAASNIIVT GNITVDAGAT LNGGSFTLDI
GGNWTNNGTF SGSTGTVNFN GPGTNISGTG TQGFNNVNIT ATNITANANT AVTIAGNLAT
TGPGVFTHVS GGTLTMTGTT KTISGTNITL DNLTISGSVS SSSSIILTGN LAVSGSFTGT
GGSVTMQGAS KTISGAGTIT FGSLIIPGSV TTAIPFFIGT TLDVSGTFSA SAGAATFTGT
STLNGTANLF NVTLNGTSLQ LSTNAVLGIA GTFTVTAGTL DVSSTAPNTV NFNGTTAQNI
NALTYNKLLL SGNAVKTAAG AITTSYFTLA TGTTFNAGSF GHTVLIDFVN SGTFNAGTST
FTFTGSNLST ITGVTTFNVL TLNKSLQSTL VNLNNDVNVA TVNMNVGTIN TGTNIFNMTV
DRSGPGIILG NVRRTQSFGL GGIYAFESPN TTLSLVGLPL TGAITVSVAI GPVSDFPQGS
AVNRVYTVST GLTVSLTTLR FHYEDAELNG NNESTMNLWY NSGSSWVFQG RTAGNTTSNY
VEYGATLAIN GRWAFSDNSN VVRWNGSVSS DWSNANNWTV VQGSPSRPPG ANDIVEIGTA
AFTNQPTINT AVAVKAISLG STQAATLTLA SGGSLTTQGN IAGKWSANVT HTINTGAQAL
TVNGDLALSD GTTAHAINLN IGAGTVTVGG SLTQSGGANI IFSGAGNLNI GSNYSYTNGT
FTPATGTVNY NGSGAQTVAG LAYNNLQIGK SAGDALLSNT ASVAGDLNIT GGSMTMNAAT
TVTGNVNISS GATLNSGVIG LTVGGNWNNS GTFSSSGGTV TLNGTGTQTV SATTFNNLII
SKGAGTATLT GNCPLNSNLT VNTGTLNLST FTANRASAGG TFTLANGATL QAGGANNFPA
GYSTYTLGAT STTNYNGTVA QAVAGVPYGH LIFSNGGTKT LSATCTVNGD LTINSGATFN
GATYTINLYG NWNNSGTFVP ATSTITLNGP TKTITGNTIF NRLTIYGSYT VSSSDITYNG
LLTIATGGSF NAGAGVATVN GDLTNNGSLT STGTTTFTGT TLQTIRFVNA ITSNSSGIIN
FNGTVPPVLN STSTPTYATL NVNNTGGVTA SVGWIVGIAF NIGNGATFNG GVSTHNVLGS
FTNNGTVTSS GTMNFIPSAA QTIKLAGNAF TSTGTVQFGG TGAMSVTGTP NALSHVVISN
TSGVTPASNW PVNGDFQITN NAVFNAGTYT YTIGGDVESN GTLNGGTSLF TLTAADAQLT
GTPNTTFYDL TITGTTTAIS DYNVSHNFTN NGTYDGTVGA LTMTGGLPSV ITGSAASFNL
AQVTNQKDPG VTTTLAKAIT AVDDITISTG ILDAAGFAIT PSATGSLTIE DNARLILRGT
QTLPAFSTYT LDTLSTVEYG GSTQAISSAT PYGNLVISAT GSKTASAVLK ILNDFTLSTG
TFVQGSFTDT VGGNWTMSSG TYTNTGSTVY FNGLGTQTIT STGAFNNLTV NKSAGIINLE
SNVTVSSVLN FILNKINTGS TFALIQPTTG TVTGASQSTG WVIGRLQKAF PTGSATRNFE
LGDATYYSPA SITFANVTTS GSILATVTPT DHPNIATSPV NPNRSVNRYW SFTNTGTGFT
TASVTMNWNA ADVDAGSNTA NFKVGSYNGS AWTTPATASP LPTSIQATGL TNLSVALAVG
QLIADNVWTG AVSVNWFVTG NWSNNLVPVS TTNATIPTGL TNYPLINTGT AMTGNLIIQT
GASVTVSGGT LQIYGAITNS GTFTASNGSI EMTGSTSQTI PANTFAGNTV LNLTTNNVAG
VTLQGALNIA GVLKATAGLF VTGTNLTLLS TATRTALIDG SGVGSVLGSV TIQRYRPNSF
GYVYLSSPLN AATVNEFSDD VNLNSSFPSF YRYIENRASS GWVSYTAASG ILASMVGYAG
NLGTSMFPVT LDMTGTVNNG TITAPTLTNN NQPYTKGFNL VGNPYPSPVD WDAVGGWTRV
NVDNAIYYFN AGTTNQYTGT YSSYINGVSS DGVANNIVPA MQGFFVHVTN GTFPVSGTLT
VNNTARVNNL TPNFHRERPL TEPLLRLCAG FTDEGSPSDP AVIYFDNSYS RDFEQDIDAL
KIINTDEHVP NLYVMAGTER QSIAAWPNDI DSTEMIPLGI TTEQEGYVSF TMPLIERMPA
GRHFYLYDKE AGITHDLHQT TPYRLFLRKG SFDTRFFLVL KAGDDGATSA ETPFYHAYAT
GNNLYAQFDK IPGEKCTITV SNVNGQVLLR KDYTGNGRYL LGSHYNGGIY VVTFYANKQQ
VSKKVFIANQ