Gene Cpin_4908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4908 
Symbol 
ID8361084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6133234 
End bp6134334 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content47% 
IMG OID644967058 
Producthypothetical protein 
Protein accessionYP_003124543 
Protein GI256423890 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.061778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0925574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACA ACGAAGTCAC TGTAGTATTA CTATGCTGTA GGGTATATCT GCAAACCAGC 
GCCATCTCCG AACTTAAAAC CTTTATCAGC CAGCACCCCG TCCAGTGGCA GCAGGTATAT
CAGCTGAGCA CGAAACATCG GGTGAGGCCA TTGGTATTCC AGGTATTAAG TAAACTGTCC
GCCGACGTAC CGGCAGAGAT CCTGCAACAA TTCAGGGCTT ACTGCCGGGA ATTCCTCCTA
TTTGCCGTTG ACCGGCACCA GGAAGCTGCG CGTATTATCA GCCTATTACA ACAGCAGGGC
ATCCAGGCCC GGCACTATAA AGGAACGGAT TACGCCTTAC TACTGTACCG TGATATCGGT
ATGCGGGAGT TTATTGATAT TGATATCATG ATTGATAGCA GTCAGACTAA CCGTGTGACT
GCCCTCATGC TGGCAGAAGG CTATGAGATG TACCATGAAA AATATTTCAG AAAGTATCCC
GCCCATTTTC AAAGGCATAT CAAAGAGGTG GCATTCGGGA AAGCTTGTCA GCGAGGCAGA
AGATTCACAT TCGAATTTCA TTACCGGCCT ACTCACGGAT TAATGGATCT GCAATATTCA
TTTGCTGATC TGCTCGGGCC AGATTATCTG CAAAGAGCAT ATACTGCTGA AGACTATTAT
AAGCTGATGG TGATCAACAA CGGTGCCAGC GACTTCTTCC CGCACCTCCG CTCATTAATG
GATATGATAT TGCTGTACAG GCAGGGGCCC TTTTCTTTAT CCCTGGAATT GCAGCCATAT
GAATTATTAT GGCGACAACT GGCAGCCGGT CTACTGGGAT TCCAGACAAA TGCTGCGCCG
GCAAATGACA ACACTTATCA ATTGCTGGCA CGCAGATTAC GACATGCTCA GCCGGGGCAA
TCTTATACCC TCCTGCAACA AGCCCGGGTA CGATTGTCAT TGGCTGCGGA TATATCCGCC
AAATGGCGTA TTACGCATCG TTATCTGACC TATCTGCTAC GACCCAATGC TAATGATATC
AATGCGTTGG AATTGCCTTA TTTCCTTTAT TATTTTACAA AACCGGTCAG ACTCGCTTCC
AATCTGCTGA AACAGAAATA A
 
Protein sequence
MLNNEVTVVL LCCRVYLQTS AISELKTFIS QHPVQWQQVY QLSTKHRVRP LVFQVLSKLS 
ADVPAEILQQ FRAYCREFLL FAVDRHQEAA RIISLLQQQG IQARHYKGTD YALLLYRDIG
MREFIDIDIM IDSSQTNRVT ALMLAEGYEM YHEKYFRKYP AHFQRHIKEV AFGKACQRGR
RFTFEFHYRP THGLMDLQYS FADLLGPDYL QRAYTAEDYY KLMVINNGAS DFFPHLRSLM
DMILLYRQGP FSLSLELQPY ELLWRQLAAG LLGFQTNAAP ANDNTYQLLA RRLRHAQPGQ
SYTLLQQARV RLSLAADISA KWRITHRYLT YLLRPNANDI NALELPYFLY YFTKPVRLAS
NLLKQK