Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4832 |
Symbol | |
ID | 8361008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6036919 |
End bp | 6037788 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644966982 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003124467 |
Protein GI | 256423814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000000287238 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGT CATTTTTAGT GTTACACCTG GCGGTGATCC TCGCAGGTTT TACAGGTGTT TTTGGTAAGC TCATCTCCCT CAATGAAGGA TTGTTAGTAT GGTATCGGGT GTTTTTCTCC TTTGCAATCC TGTTTTTCAT TCTTAGATTA TTTAAAGTAA AAGCCAGTCT TTCTTTAAAA GAGAAATTAG ACGTCTCTAA GATCGGGATG TTTATTGCCA TACACTGGGT CTTCTTTTAT GCCAGTATCA AGTATTCCAA TATTTCGATA GGGGTGGTTT GTTATTCTTT AACGGGGTTC TTTACAGCTG TTTTTGAACC GCTGATCAAC AGGAAGCCAT TTGTGCTTTC GGCGCTGGTA TTGAGCGGAC TGACCTTACT GGGGATTAGC CTTATCTTTC ACTTTGATAC TTCTTATCAG CTGGGTATTG GGCTGGGGGT AATTTCCTCG GCCTTTGCTG CTTTGTATAC CATTTATAAT GAACGGCTGG TAAAGCGCTA TGATAGTAAA CAGATCAATT ATTATCAGAT GATGGGAGCG ACTATCGGAC TGGGATTGCT GATGCCGGTA TATCTGCATT TTTTTCCTGT GTGGAGCCTG GTACCTGATC TGAAAGATAC GTTATACCTG TTATTGCTGT CTTCTGTCTG CACAGTGGGT TTGTATATTT TATTCGCAGA ATCATTGAAA AGACTTTCTG CTTTTACAGT GAATCTGAGT TTCAATCTGG AACCTATTTA TGCGATTATA CTGGCATTCC TGTTTTTTAA TGAAGGGAAG GAGTTGAATA TTTCTTTTTA TGTGGGGCTG TTTTTTGTAA TGACTTCTGT CGTGTTGCAG ACTTACCTCT CTATGAGGGA TCATAAATAA
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Protein sequence | MKKSFLVLHL AVILAGFTGV FGKLISLNEG LLVWYRVFFS FAILFFILRL FKVKASLSLK EKLDVSKIGM FIAIHWVFFY ASIKYSNISI GVVCYSLTGF FTAVFEPLIN RKPFVLSALV LSGLTLLGIS LIFHFDTSYQ LGIGLGVISS AFAALYTIYN ERLVKRYDSK QINYYQMMGA TIGLGLLMPV YLHFFPVWSL VPDLKDTLYL LLLSSVCTVG LYILFAESLK RLSAFTVNLS FNLEPIYAII LAFLFFNEGK ELNISFYVGL FFVMTSVVLQ TYLSMRDHK
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