| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4785 |
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| Symbol | |
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| ID | 8360961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5956686 |
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| End bp | 5957540 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966935 |
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| Product | integrase family protein |
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| Protein accession | YP_003124420 |
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| Protein GI | 256423767 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000301446 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.920031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTTT ATATTATACA GTTCCAAAAT TATTTACAGC AAAGTGGCTA TGGGCTTAGT
ACACAGCGGA TGCTGCCCGC ATGTGTGCGA GAATTTTTGG AATATGGTGG TTTTAAAAGC
ATCGTAGAAA TAAGCCCTGG TATCATAGTG TTATTTTATG AGTGGTTACA TATCCGTCCT
TTAAAATACC GGTCAGGGGC ATTGAGCGGA ATCATGATCA GTCATTATGT GTATGCGTTA
AAAGTGTTTT TTAGCTGGCA GGAGAGTAGT GACGGGTTGC AGTATAATCC GATGAGTGGG
TTAAAGTTCC GTAGACATGC CAGCGGCAGG CGTGAAGCGC TCAGTGTTGA GGTAGTGGAA
GCGTTGTTTA CGGCAGCAAT CAGTATGCGT GAGAAAGTGA TGTTACACTT GTTTTACAGT
TGTGGGTTGC GTCGTAGTGA GGCGGAGATG TTAAACGTCA GAGATGTGCA GGTGCGTCAC
CGGTTATTAT ATGTTCGCTC TGGAAAAGGT GCGAGCCGCA GGGTGATCCC GTTAACGGGC
AAAGTGGCGG GGGAGTTAGG TGTTTACCTG GAAGAATATC GTAAATCCGG AGCAGTAGAG
AAAGGTGCGT TTATGTTAAA CCGGGAAGGC AGGCGCATGA GTGGTAGTAG TTACAACCGC
TTACTGAAAG GGTTGGTTGG TCGTGCAGGA TTATGGCAAG GGATCAGTCT TCATTATTTA
CGTCATAGTA TCGCAACGCA CCTGTTACAG GGCGGTATGT CGCTTGAATA TGTACGTGAC
TTTTTAGGCC ACCGTCACCT GGAAGCGACG CAGATCTATG CGAAAGTTGG CGCCCATCAA
CTGGCAGTAA TATGA
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| Protein sequence | MEVYIIQFQN YLQQSGYGLS TQRMLPACVR EFLEYGGFKS IVEISPGIIV LFYEWLHIRP
LKYRSGALSG IMISHYVYAL KVFFSWQESS DGLQYNPMSG LKFRRHASGR REALSVEVVE
ALFTAAISMR EKVMLHLFYS CGLRRSEAEM LNVRDVQVRH RLLYVRSGKG ASRRVIPLTG
KVAGELGVYL EEYRKSGAVE KGAFMLNREG RRMSGSSYNR LLKGLVGRAG LWQGISLHYL
RHSIATHLLQ GGMSLEYVRD FLGHRHLEAT QIYAKVGAHQ LAVI
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