| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4728 |
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| Symbol | |
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| ID | 8360904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5901681 |
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| End bp | 5903330 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966880 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003124365 |
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| Protein GI | 256423712 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.192891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00040203 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCAAT CAGCTGATAC ACACCACTTA GGTAGCCTGG ACTACCTCGT GTTTTTTATC
TATTTTATTA TTGTCGCCGG CTTCGGCTAC TATATTTTTC AGCGTAAAAG ATCCAAAACG
GCAAGTACGA AGGACTTTTT CCTGGCAGAA GGCTCCCTGA CATGGTGGGC GATCGGGGCC
TCCCTGATTG CTTCCAATAT CTCGGCAGAA CATTTTATCG GACAGTCCGG TTCCGGTTTT
GCCCTTGGTC TGGCCATCTC TTCCTATGAG TGGATCGCTG CAGCTACCCT GATCATCGTA
GCCATCTTCT TCATCCCGAT CTACCTGAAA AACAAGATCT ACACCATGCC CCAGTTCCTC
CTGGAACGGT ACAACGCCAC GGTGAGTACA ATCATGGCCA TTTTCTGGCT GGTGGTGTAC
GTACTCGTCA ACCTGACCTC TATCGTGTAC CTGGGGGCAC TGGCGATTAC AGCTATTTCG
GGTATACCGT TCTTCTGGTG TATCATCGGG TTGGCCATCT TTGCCCTGTT AGTGACCCTG
GGAGGTATGA AGGTGATCGG TTATACCGAC GTGATACAGG TATTTGTCCT GATCGTAGGC
GGTCTGGCTA CTACTTACCT CGCACTGCAA ATGGTGTCTA ATCACTTCGG TTACGGTGAC
AATATCCTCA AAGGACTAGC TATCGTACAT GAGCGCGCAG ACACGCATTT CCATATGATC
TTCTCTTCGG ATCACCCATA TTATAAAGAC CTGCCGGGCC TCTCCGTGAT CGTTGGTGGT
ATGTGGATCA ACAATCTCAA CTATTGGGGA TGTAACCAGT ATATCATTCA GCGTGCCCTG
GGTGCGGATC TGAAAACTGC CCGTAATGGT ATCCTGTTTG CCGCTTTCCT GAAACTGCTG
ATTCCGCTGA TTGCGGTAAT CCCAGGTATT ACGGCTTATG TACTGTTCAA GGAAGGCGTA
TTTAACGACG AACTCAGAAA CGCTGCCGGT GTGGTAAAGC CTGACCTGGC ATACCCGACC
CTCATGAACC TGTTGCCGGT AGGTCTGAAA GGACTGGCCT TTGCAGCACT GACTGCCGCT
ATTGTGGCAT CATTGGCGGG TAAACTGAAC AGTATCTCTA CCATCTTCTC ACTCGATATC
TATCACCGTT ATTTTAACAA GCAGGCAAGT GAAAAACACC TGGTAAGAGT AGGCCGTGTG
GCTGTAATCG TATCAATGGT GATCGCCTGT ATCGTAGCGC CTGCACTGAC GACGCTTGAT
CAGGCTTACC AGTTCATCCA GGACTGTGTA GGATACATTT CTCCTGGTAT CCTGGCCATA
TTCCTGCTGG GTTTCTTCTG GAGACGTACC ACTTCTCTGG CCGCATTACT GGCAGCAATA
CTGACTATTC CATTGTCAGC TATTCTGAAC TTCCTGCCTA CCTGGACCAA AGGCGCATTC
CCGGAATATC CTTTCCTGGA TCGTATGTCC ATCGTATTTG TATTCCTGGT AGCACTGATG
ATAATCGTTA CATTGCTGGA TAAGCGTAGT AAAGATCAGA AGCGCATTAT CGTGATCGAT
CCGGCGTTGT TCCGCACTAC ACCAGTGTTT ATCGCAGGTA GCGTGATCAT TACAGCCATC
CTGATCGTAT TGTACACCGT GTTCTGGTAA
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| Protein sequence | MNQSADTHHL GSLDYLVFFI YFIIVAGFGY YIFQRKRSKT ASTKDFFLAE GSLTWWAIGA
SLIASNISAE HFIGQSGSGF ALGLAISSYE WIAAATLIIV AIFFIPIYLK NKIYTMPQFL
LERYNATVST IMAIFWLVVY VLVNLTSIVY LGALAITAIS GIPFFWCIIG LAIFALLVTL
GGMKVIGYTD VIQVFVLIVG GLATTYLALQ MVSNHFGYGD NILKGLAIVH ERADTHFHMI
FSSDHPYYKD LPGLSVIVGG MWINNLNYWG CNQYIIQRAL GADLKTARNG ILFAAFLKLL
IPLIAVIPGI TAYVLFKEGV FNDELRNAAG VVKPDLAYPT LMNLLPVGLK GLAFAALTAA
IVASLAGKLN SISTIFSLDI YHRYFNKQAS EKHLVRVGRV AVIVSMVIAC IVAPALTTLD
QAYQFIQDCV GYISPGILAI FLLGFFWRRT TSLAALLAAI LTIPLSAILN FLPTWTKGAF
PEYPFLDRMS IVFVFLVALM IIVTLLDKRS KDQKRIIVID PALFRTTPVF IAGSVIITAI
LIVLYTVFW
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