| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4717 |
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| Symbol | |
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| ID | 8360893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5882952 |
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| End bp | 5884214 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966870 |
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| Product | Na+ dependent nucleoside transporter domain protein |
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| Protein accession | YP_003124355 |
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| Protein GI | 256423702 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.210913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00474985 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGACGTT TCCAAGGACT TATCGGGATA ATCCTTATCC TCGGACTGGC TTACTTAGTT
TCGAACAATA AAAAGAAGAT CAATTTCCGG CTGGTGTTCA GCGGAATCGG CTTGCAGGTG
CTGATCGCCC TGCTCATTTT TAAAGTAGGA TTCGTTTTTC GATTCTTTCA GGGCGTGGGT
AAGGCCATGG GTAAACTGGA AGATTTTGCA CGTCAGGGCG CTGCTTTCGT ATATGGAGGT
ATTGCTGTAG AATCCAAACC TGGTACTATT GTCAACTACC TGAACGGAGG TTTCGTATTT
GCCTTTAATA TCACCGCCGC TATCATATTA GTATGTTGCC TGGTGGCTAT CCTTTATCAC
TTTGGTATCA TGCAGCGGAT TGTGGCTGTC ATCGCGAGAG CGATGAACGT CATCATGCGT
GTGAGTGGCG CAGAAGCCCT GAGTAATGTG GCCAGTGCCT TTGTGGGACA GATTGAAGCG
CAGGTGATGA TCAGACCATA TCTCCCTTAT ATGACCCGCA GTGAACTGCT GGCGTCTATG
AGTGGTAGTC TGGCCTGTAT TGCCGGCGGG ATCCTGGTGG TATACTCCAA TATGGGTGCA
GCCGCTGGTC TGGACCTCGC TCCTATGCTG ATCACGGCAA GTCTGATGGC TGCGCCGGGT
GCACTGGTGA TCTCCAAGAT CGTGTTCCCG GAAACAGAAG AATCTCAGAC GATGGGAAAA
GTAAAACTGG AAGTAAAAAG CCAGTATGTG AATGTAATTG ATGCCATCAC GCATGGTGCG
GGCGATGGTT TTAAAATAGC CATGAACGTG ATCGCGATGA TCATCGGGTT CATTGCACTG
ATCGCCTTCC TCGACTGGGG ATTGCTGAAA GTAGGTCAGT TGTGTCACCT GCCGTTTGAC
CTGAGTCTGA ACTGGATCTT TGGAAAGATC TTTTACCCGG TAGCCTGGGC GATGGGCGTT
CCTAACCAGG ATGTGAACAG TGTAGCGACC CTCCTGGGAC AGAAACTGAC CATCAACGAG
TTCATCGCAT TCAAGAACCT GACAGATAAA ACGATCCCTG TCGTATCAGA AAGAGGTTTG
CTGATCGTGA GTATTGCAGT TTGTGGTTTC GCCAACTTCA GCAGTGTAGG TATGCAGATC
GGTGGTATTG GTGTACTTGC ACCAGAAAGA CGTGCCGACC TTGCTTCTCT TGGGTTGAAA
GCACTCTTCT GCGGAACCCT GGCATCTTAT CTGTCGGCGA CGATTGCCGG CATACTTATC
TAA
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| Protein sequence | MGRFQGLIGI ILILGLAYLV SNNKKKINFR LVFSGIGLQV LIALLIFKVG FVFRFFQGVG
KAMGKLEDFA RQGAAFVYGG IAVESKPGTI VNYLNGGFVF AFNITAAIIL VCCLVAILYH
FGIMQRIVAV IARAMNVIMR VSGAEALSNV ASAFVGQIEA QVMIRPYLPY MTRSELLASM
SGSLACIAGG ILVVYSNMGA AAGLDLAPML ITASLMAAPG ALVISKIVFP ETEESQTMGK
VKLEVKSQYV NVIDAITHGA GDGFKIAMNV IAMIIGFIAL IAFLDWGLLK VGQLCHLPFD
LSLNWIFGKI FYPVAWAMGV PNQDVNSVAT LLGQKLTINE FIAFKNLTDK TIPVVSERGL
LIVSIAVCGF ANFSSVGMQI GGIGVLAPER RADLASLGLK ALFCGTLASY LSATIAGILI
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