Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4716 |
Symbol | |
ID | 8360892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5880480 |
End bp | 5882759 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966869 |
Product | membrane-bound dehydrogenase domain protein |
Protein accession | YP_003124354 |
Protein GI | 256423701 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0863725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0139154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTACA GGTTTTATCT TATTGGACTA AGTCTATGGT TAGCAGCGTG TAATAGTGGC GGCGACAAAA AGACTGGCTC TTCCTCCGAC TCACTGACTA TCAGGGAAAA ATACGCAACA TCTCCCGTAT CAGATGCAAA AACAGCAATC TCGCAAATGG CCGTCGAAAA AGGGCTGGAG GTGCAGCTGG TAGCTGCAGA GCCGCTGGTA ACCGTACCTG TTGCCATGAC CTTCGACGAA AAAGGACGTA TGTGGGTAGT AGAAATGACC GGTTATATGC CTGACACAGT GGGTACCGGT GAAGATATTC CTAACGGTAA AATAGTGATA CTGGAAGATA CCAACCAGGA TGGGGTGGCT GATAAACGCA CGGTATTTAT AGATTCTCTT GTGTTGCCAA GAGCCATCTG CCTGGTGGAG AACGGGATAC TGATCGCTGA ACCGCCTAAA TTGTCCTTTA TCGAAATTAA CAATGACAAA CCTGGCAAAC GAACCCTGGT AGATGATAAA TATACAGAAG GGGGAAATGT GGAGCATCAG CCCAACGGAC TGTTGCGTGC TATGGACAAC TGGATCTACA ACGCGAAATC AGATAAGCGC TACCGTAAGG TGGGGAATAA ATGGGTAAAG GAGCTGACGC ATTTCCGTGG ACAGTGGGGT ATTTCTCAGG ATAATTACGG CCGCCTGTTC TATAATAATA ACTCGGAGAA CGTACTGGGA GATTATTTCC CTGCGGGTCT GGGGGCACAT AACCCGCAAC AGAAAAATGT ATCCGGTTAT GACGAGAAGA TCGTGGCGGA CAACCGTGTA TACCCGGCAA GGGCTACTAC AGGGGTAAAC CGTGGTTATA TGAAAGGTAC CCTGAATGAT AGTCTGCGCC TGGTAAATAT GACAGCGGCT TGTAGTCCGC TGGTATACAG AGGCGCTTTA CTCGGCAAAG CATACGATAA TAATATATTC GTGGCCGAAC CTTCCGGTAA CCTGATCAAG CGCAACATCA TCAAAGACAG CGGTTACATC GTAAAAGGAC AACAGGCCTA TGCACACCAG GAATTCCTGA CCAGTACCGA CGAACGTTTC AGACCGGTAA GCCTGTATGA TGGTCCGGAC GGCTCATTGT ATGTACTCGA TATGTACAGG GGGATCATCC AGCATAAGAC TTACCTCACG CCTTACTTAA AGAACGAGAT TAAAAGCCGT AACCTGACAA ATCCCTTGAA CTGCGGACGT ATCTACCGGA TCGTTCCGGC AGGCACACAT CCCAGGGCCA CGATTATTGA AAATGATCCA GCCCATCTGC TGGCTTTATT AAGTAACCCT AATGGCTGGT TAAGAGATAA GGCGCAACAG ATGATCATCG ACCATCATTA TACCACACTG GTCCCTGCTT TAAGAGCATT GTTACAGCAG AAAGACAGTC TGTATACACA GGCACATGCC CTTTGGACAC TGGAAGGTCT GGGCGCTTTG CAAATCACAG ATGTGATGGT TTTACTGCAC CAGGCCAACC CATATGCGCA GGTACAGGGA CTGGCGGCTT TGCCCGCTGT GATCAATGCG GCTAATGGTA AAGCAGTGTT AAGTGAACTG GCGCTTATGC AGAAGAATGT GTTCCTGGCG CCTTACGTGG CATTATTACT GCCGGCACTG CCTACCCAGT TACATACGGA AGTGGAGCAA CTGAAAATGC AGCTCGTGGA AGCGTATGCC AACGATCCCT ATGTGGCGGA TGCGGTGATC AATAGTATGG CCGGAAAAGA GATTGAGTTA CAGCAACGGC TGAAGAACTG GAACCCCGAC ACAACACTGG TGCTGGCTAA ACGCCTGAAA AGGGTGATAA AGGATATCGA AAACCACCGG AAGGCCAGTA TGGATGAAAG TTTACAAAAG ACTTACCCAA GAGGCGCTGT TCTGTTCAAA ACAGTTTGTC AGACCTGCCA TGGTGCAGAT GGTGATGGTA TTCAATCTCT TGCGCCGCCA TTGAACCAGT CGGAGATTGT AACCGGCGAT AAACATAAAC TGGCAGCGAT TGTGTTGTTC GGACTGACCG GACCTGTAAC GGTAGCGGGT AAACAATATA AAGCGCCTGA GATCAGTGGT GATATGCCGG GTATTGGCAG CAATGACGAG TTTTCGGATA AAGACATTGC GGAAGTACTG AGTTATATCC GTGGCGCCTG GAGCAACCGG GCGGCTAAAG TGGTAGAGAA AGATATCCAG GAGGTAAGGA AACAATACAA GGGCAGACAG AAGTCATTTA CCATCGGTGA ACTGAAATAA
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Protein sequence | MRYRFYLIGL SLWLAACNSG GDKKTGSSSD SLTIREKYAT SPVSDAKTAI SQMAVEKGLE VQLVAAEPLV TVPVAMTFDE KGRMWVVEMT GYMPDTVGTG EDIPNGKIVI LEDTNQDGVA DKRTVFIDSL VLPRAICLVE NGILIAEPPK LSFIEINNDK PGKRTLVDDK YTEGGNVEHQ PNGLLRAMDN WIYNAKSDKR YRKVGNKWVK ELTHFRGQWG ISQDNYGRLF YNNNSENVLG DYFPAGLGAH NPQQKNVSGY DEKIVADNRV YPARATTGVN RGYMKGTLND SLRLVNMTAA CSPLVYRGAL LGKAYDNNIF VAEPSGNLIK RNIIKDSGYI VKGQQAYAHQ EFLTSTDERF RPVSLYDGPD GSLYVLDMYR GIIQHKTYLT PYLKNEIKSR NLTNPLNCGR IYRIVPAGTH PRATIIENDP AHLLALLSNP NGWLRDKAQQ MIIDHHYTTL VPALRALLQQ KDSLYTQAHA LWTLEGLGAL QITDVMVLLH QANPYAQVQG LAALPAVINA ANGKAVLSEL ALMQKNVFLA PYVALLLPAL PTQLHTEVEQ LKMQLVEAYA NDPYVADAVI NSMAGKEIEL QQRLKNWNPD TTLVLAKRLK RVIKDIENHR KASMDESLQK TYPRGAVLFK TVCQTCHGAD GDGIQSLAPP LNQSEIVTGD KHKLAAIVLF GLTGPVTVAG KQYKAPEISG DMPGIGSNDE FSDKDIAEVL SYIRGAWSNR AAKVVEKDIQ EVRKQYKGRQ KSFTIGELK
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