| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4620 |
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| Symbol | |
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| ID | 8360793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5766707 |
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| End bp | 5767588 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644966774 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124262 |
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| Protein GI | 256423609 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.142844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATC AGGCTGTTTA TACTCTCATC AATCAACAAA ATGGCAACCT TTCCTTTAAG
GTATTCGAAT TCGATAATAA CAGTTACTTT GATCATATCC AGCGTAATAA TTACTTTACC
ATCATTATCG TTACTTCAGG AGAAGGGGTT GCAAAAGTAG ATTTCTGCGA ATATCCTTTT
CAGGAAAATA GCATGTTCGC TTTTTATCCC TACCAACCCT TCCTGCTGCA GGTAAAAGGA
CCTTTGGTCG GATTTTGTAT TCAGTTTCAC CACGACTTTT TCTGCATATA CAGACATCAC
AAAGAGATTG CCACCAATGG TATTCTGTTC AATAATATCT ATCAGCAACC GTTTATCTCG
CTGGAGGAGA GTGCAAAGGC AACCCTGCTT AACTTCATCA AAGAGATCAT CGGTGAACTG
AAAATAGATG CACTGAGAAG AGATGAAGTG ATCGTTTCCT ATCTGAAGAT ATTCCTGGTA
ATCGCTACCC GGATAAAACT GGAACAACAA TCCGTGCAGG AAGGCGAAGC CGTTAATGCC
AAACAGCTGT TGCTCGTGCA GCGCCTAAGA AATGCAATAG AAGACAATTT CAGGGTCAAA
CATGCACCTA GTGATTACGC CGATTTATTA CATCTGACGT CACCGGTATT ATCAAAGATT
GCTAAAACCC ATTTTAAGAA ACCTCTTTCT GAACTGATCT CTGAGCGTAT TATTATTGAG
GCAAAAAGAG AATTGTACCT CACACCAAAA ACGATCAAAG AGATCGCCTA TGAGCTTGGC
TATGAAGATG AATACTATTT TAGCAGGTTC TTTAAGAGTA AAACAGCGAT CTCTCCACAG
TCTTACCGGG AGACAGTCGG TTTTAACCGG CAAGCAGGTT GA
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| Protein sequence | MSNQAVYTLI NQQNGNLSFK VFEFDNNSYF DHIQRNNYFT IIIVTSGEGV AKVDFCEYPF
QENSMFAFYP YQPFLLQVKG PLVGFCIQFH HDFFCIYRHH KEIATNGILF NNIYQQPFIS
LEESAKATLL NFIKEIIGEL KIDALRRDEV IVSYLKIFLV IATRIKLEQQ SVQEGEAVNA
KQLLLVQRLR NAIEDNFRVK HAPSDYADLL HLTSPVLSKI AKTHFKKPLS ELISERIIIE
AKRELYLTPK TIKEIAYELG YEDEYYFSRF FKSKTAISPQ SYRETVGFNR QAG
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