Gene Cpin_4590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4590 
Symbol 
ID8360763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5734058 
End bp5734528 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content43% 
IMG OID644966744 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003124232 
Protein GI256423579 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.220277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA TCGACGAATC AGGGATACTC GCTATTTCGA CCAGATTACA GCGTTTAAGT 
GATCAGCTCC GTAAAGACGG GGCGCTGATA TATAAAGCCT TTAATATTGA TTTTGAACCC
AAATGGTTCC CTGTCATCTA TACCTTACAC CATAAGCCGG AGATCAGCGT TGTTGAACTG
GCAGCGGAAA TAGGCTATGC GCATCCTTCT ACGATCAGCC TTTTAAAAGA GCTGGAAAAA
GAGAAATTAA TAGAGAGTAA AAAGGATGCG CATGATGAGC GTAAACGCCT CTTGCGACTA
AGTACAAAAG GCAAGGCACT CGTTACCCGT ATGCAGCCTG TCTGGCAGGC AATGACCGAA
GCTTTAAAAG AACTGACCGA CACACAACAT AACCTGATGA AGGCCATTGA CGAAGTGGAA
GAGCAATTTA CCATGAAAGG CTTTTATGAG CGGGTAAAAA GGAAGATGTA A
 
Protein sequence
MNIIDESGIL AISTRLQRLS DQLRKDGALI YKAFNIDFEP KWFPVIYTLH HKPEISVVEL 
AAEIGYAHPS TISLLKELEK EKLIESKKDA HDERKRLLRL STKGKALVTR MQPVWQAMTE
ALKELTDTQH NLMKAIDEVE EQFTMKGFYE RVKRKM