| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4414 |
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| Symbol | |
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| ID | 8360587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5501485 |
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| End bp | 5503404 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966573 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124061 |
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| Protein GI | 256423408 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCGA AATTAACCTT GCCGGTGGCC GCCAGTTTAC TCTGTACGCT GACGCTGAAG
GCCCAGGAAA AGATAAGTGA TCTGGATGCA GTCACTGTTA CCGCCACTGT CAATCCCGTG
GTAAGCTCCA AAACCGGTCG TAATCTTTAT GTTATCAAGG GCGAGGATAT CGCCAGGATG
CCTGTTCACT CCGTGGACGA GGTACTGCGC TATCTGCCAG GTGTAGAAGT GCAGGCAAAG
GGCCCTATGG GCGCCGGCAG CGATATCGTG ATCAGGGGTG GTACTTTTCA GCAGGTACTG
GTAATACTCG ACGGCATACG TGTAAATGAC CCCAATACCG GCCATTTCAG CAGCTATATC
CCGGTTAATC CGGCAGAAAT CGACCATATT GAGGTGCTGA AGGGTGCTTC TTCCGCTATT
TATGGCTCTG ATGCGGTAGG TGGTGTGATA CACATCATTA CTAAGACATT TGCCCGTACC
GGTACGAGTA CACCCACCAG AAAGATCACG GCTGGTGTAA CCGGTGGTGA ATATGGCTTG
TTCAACGCCA ACGCCAATGC ATATTACAGC ACGGAAAAGC TGGCGGTGAA TATCGGTGGA
CAAACCAACA ATGCCGACGG TCAGCCGCAA AGGGGTATCG ACGGTTATTT CCACCTGCAT
ACGGTATCCG GTTCTGCCAG TTACCGTTTC AACGAAAACT GGAAACTGTC TTACCGTTTA
AGTTATGACA GCCGCAAATT TGCCGCCCAG AACTTCTACA CCACTTTCGC CTCTGATACT
GCCAGCGAAA AACTTTCTAC CTGGTGGCAG CAGCTGAATC TTCAATATCG TAAGGGTAAA
GATGGGTTTA GTCTGATGGC CGGTTACAAG AACATGAACG ATCACTACGT GTACAATTCT
GTGTCTTTAG CCAATGATAA CCGCAGCAAA TTATTCCAGT CCCTTGCGAT CTACGAACAT
GCGTTCAGTA ATGATCTTAA CCTGGTGGCC GGCGGACAGT TCCAGCAGAA AAACATCGTT
TCCAATGACA GGGGTAATCA TACTGTGAAC CAGGCTGCTG GTTTTGTGTC TTTGACCGCT
ACCCTGTTTG ATGCGTTGAC ATTGAGTCCG GCAGTACGCC TTGACTGGGA TGAACGCAGT
GGTTCTGAAC TGGTACCTCA GCTGAATGCC AGTTACCGTA CCGGCAAATT CCAGGTAAGA
GGTAGTGCGG GTAAAACCAT CCGTAATGCC GACTTTACCG AGCGTTACAA CAACAATAAC
AAACCGATTG TTACCAGCGG AAAGATCGGT AATCCGGATC TGAAAGCGGA ACGTTCTTTT
AGTTATGAAG CAGGTGCCGA CTACTTTGGC AAAACACTCC GTGTTTCTTC TACGGTGTTC
CAACGCCGGT ATAACGACCT GATTGACTGG GCGACTACAC CATATGCGAA TATGCCGTAC
AAACACAACC TGTCTCCGAC GGGCACGTAT TCCCTGGCGA CCAATATTTC TAAAATGGTG
ACCAGCGGAC TGGAAACAGA TATCCAGTGG ACGAAGACCT ATAAAGAAAA ACATACTGTT
TCAGCGACAG CCGGTACTAC CTGGTTGTAT TCCGATATCC AGGAAGGACA ATCTTCTTTC
TATATCTCTT CACATGCGCG TTTCCTGCTG AATGGTATGT TGCAATACCG CAATTCACTG
TTCTCCATCA GCGCAAATGG TTTGTATAAA GTACGCGATC CTCAGTCTGC CGCAAACATT
GCAGGTGTAG TAACCAAAGA ATACTTTATC GCCAGTGTGA AAGCGGATGT ATTTGTGATC
AAAAATATGC TCAGCTTATC TGTTGAAGCG GACAACGTTT TCAATAAAAC ATATGCCGAT
CTGACTGGTG CGCAGATGCC AGGCAGATGG CTGATGGGTG GTGTGAGACT GACTTTGTAA
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| Protein sequence | MFSKLTLPVA ASLLCTLTLK AQEKISDLDA VTVTATVNPV VSSKTGRNLY VIKGEDIARM
PVHSVDEVLR YLPGVEVQAK GPMGAGSDIV IRGGTFQQVL VILDGIRVND PNTGHFSSYI
PVNPAEIDHI EVLKGASSAI YGSDAVGGVI HIITKTFART GTSTPTRKIT AGVTGGEYGL
FNANANAYYS TEKLAVNIGG QTNNADGQPQ RGIDGYFHLH TVSGSASYRF NENWKLSYRL
SYDSRKFAAQ NFYTTFASDT ASEKLSTWWQ QLNLQYRKGK DGFSLMAGYK NMNDHYVYNS
VSLANDNRSK LFQSLAIYEH AFSNDLNLVA GGQFQQKNIV SNDRGNHTVN QAAGFVSLTA
TLFDALTLSP AVRLDWDERS GSELVPQLNA SYRTGKFQVR GSAGKTIRNA DFTERYNNNN
KPIVTSGKIG NPDLKAERSF SYEAGADYFG KTLRVSSTVF QRRYNDLIDW ATTPYANMPY
KHNLSPTGTY SLATNISKMV TSGLETDIQW TKTYKEKHTV SATAGTTWLY SDIQEGQSSF
YISSHARFLL NGMLQYRNSL FSISANGLYK VRDPQSAANI AGVVTKEYFI ASVKADVFVI
KNMLSLSVEA DNVFNKTYAD LTGAQMPGRW LMGGVRLTL
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