| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4371 |
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| Symbol | |
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| ID | 8360544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5436435 |
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| End bp | 5439059 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966531 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124019 |
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| Protein GI | 256423366 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000169571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0339201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATT TTATAACTGT TTATTTATTA CTCGCCTGGT TGACTGTCAA TGCACAGAAT
GCCAGTGAAA AACTCAGTAT CAATATTCCG GCAGGCTCTC TGGAAGCAAC CCTGAAACTG
CTGGAACAGA AAAGCAGAAC ACCGATATCC TACGAACTTA CACGTGTAAG AGGGATACAG
GTCAAAGCGC ACCTTTACAT AGATACGCCG CTCGGAAAAA TTCTGGGGGA TATTCTGAAA
GGTACACCGC TGGACTATAA ACAGAAAGGT GGTAATATCC TGATTATCGC ACGCCCGGCC
AGTGTGAATA CGCTGAGCGG CTTTGTGGAA GATGCGGTAA GCGGGGAAAA ACTGATCGGC
GTTTCAATCG TAACGACGCA GTTGCAGGGT GGTACGACGA CCAACAACTA TGGTTTTTAT
AGTCTTACCG TACCCGGCGA TTCATTACGC CTTCAGATAT CCTATATCGG TTATAGCCGC
CTCGATACCA TCATCAGTAT GGTGGATAAT CCGCGTATTA ACTTCAGGTT GCGCACCGGC
AGCAGACAAC TGGAAGCCAT CACCGTAAAC GGAACGCATA CAAGAAGGAT ACAGGAATCC
TCACAAATGA GCAGTATCAA TCTGCCCGCT GCCCAGGTAC GTTCGCTGCC TCGCCTGTTG
GGAGAACCCG ACCTGCTGAA GGCATTGCAG CTGATGCCCG GTGTAAAACA GGGAACGGAA
GGATCCAGTG CCTTGTTGAT CCGGGGAGGA ACGCCCGACC AGAACCTGAT ATTGCTGGAT
GGAGCGCCCT TATATCATCC GATGCACCTG CTGGGTATAT TCTCGACATT CAATACCAGT
GTGCTCAAAG ATGTGACCTT GTATAAAGGC GCATTTCCGG CACGGTATGG CGGTCGACTG
TCATCAGTGG TCGATATCTC CACCAAAGAC GGCAATATGT ACAAACACCA CGGAGAGTTT
TCCGTTGGAT TGTTGTCTAC CCAGTTAACA CTGGAAGGAC CACTGAAAAA AGGTAAAACA
TCTTACGTGT TATCAGGACG CCGGTCTTAC CCCGACCTGA TTGCCAGTCC GTTTGTAAAA
AGCTCAGAGG AGGATCTGCA GAAATTCAGT CTTTTTTTCT ATGACCTGAA TGCAAAGATC
CATCATCAGT TCTCAGAAAA GGATAAGCTC TACCTGAGCT TTTACATGGG AAAAGATAAA
CTCCGGATCC GCGACCGCTA CTCGGATGAT AGCGAAGGAC CGACAGATAA CTATGACTTA
TCAGATCTGA ATATTCAATG GGGAAACATC ACCGGCACCC TGCGATGGAC GCATATCGTT
TCTCCAAAGC TCTTTACCAA TACAATGCTG ATCGGCAGCA GCTATAAATT CAGTACGGGT
ATTCATACCG AAGATAAATA CGATGCGGAT GCCAGCAGTA ATACACTGAA GCTGAATTCA
GGCATCCGCG ATTATGGTGT AAAAACAGAT ATAGACTATC GACCCATGCC AGCCCATGCC
ATCAAGATGG GAGCGTCCTA TATGCATCGC AGGTTTACAC CGGGTATCAT TCGTATGAAA
CAGACCGAAG GAGATGACAC AATACTGGAT TCGGTAAATA ATAACCGTAA TATCCCGGCA
TCGGAAATGG ATCTGTATGC GGAGGATGAC TGGGAAATCA CATCTCGGCT GAAATTAAAT
GCAGGCTTAC ACTGGAGTGG CTTCAGCGTA CAGGATCACT TTTATCATTC CCTGCAACCG
CGTGTTAGTA TGCGCTTCCT GTTGCCCGGA GACTGGGGAT TAAAAGCGTC TTATACGCAC
ATGACGCAAT ACATTCACTT GTTGGCCAAC AATTCCATTT CGTTGCCTAC AGATCTCTGG
GTGCCAGCAA CAAGAAAAGT TGCACCACAG CAGGCAGACC AGTTTGCGTT AGGACTCGCA
CGTAACCTGT TCCGCAACAG GTACGAATTT TCTGCTGAGG TGTATTACAA AAAAATGAGG
GAGGTGGCAG AGTATAAAGA TGGTGCGGAA TATCTTACAA CCAGCAAGGG AGATACCTGG
CAGGATCAGA TTGCTTCCGG CACCGGCAGA TCTTACGGAC TAGAGGTATT GCTGCAGAAA
AAAACAGGTC GGCTGACCGG CTGGCTCGGA TATACCTGGG CGATCTCAGA TCGTAATATT
CCAGGTGTCA ATTATGGTCA TACGTTCTAT TATAAATATG ACCGCCGCCA CGATTTCCAC
CTGGTCACCA TTTACAAGCT CAGAAAGAAC ATAGAGCTGT CGGGTAGCTG GACCTATCAG
TCTGCGTCTC CTTTCACGGT GCCGGTAGCC CGTTATGAAG GGACGATCGG TCCTGTAACA
CCGAATGATC CGAACAATTG GTCGCCGACT GTAGACTATA TCAACAACCG GAATAATGTA
AGGATCACCG CCTATCATCG TCTGGATCTT GGCGTCAACT TTATCAAAGA GAAGAAGAAT
GGAAATGTGC GGACCTGGAA TATCAGTGTA TTGAATGCGT ATAACAGGAT GAATCCATTC
TTTTATTACG TAAAAGATTA TTCGGATAAT AAAGCGAAAG TCAATCTTAA TGGCCTCGTT
TTATTACCAC TCACACCTAG CTTTTCTTAT AGTTTAAAAT TCTAA
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| Protein sequence | MRHFITVYLL LAWLTVNAQN ASEKLSINIP AGSLEATLKL LEQKSRTPIS YELTRVRGIQ
VKAHLYIDTP LGKILGDILK GTPLDYKQKG GNILIIARPA SVNTLSGFVE DAVSGEKLIG
VSIVTTQLQG GTTTNNYGFY SLTVPGDSLR LQISYIGYSR LDTIISMVDN PRINFRLRTG
SRQLEAITVN GTHTRRIQES SQMSSINLPA AQVRSLPRLL GEPDLLKALQ LMPGVKQGTE
GSSALLIRGG TPDQNLILLD GAPLYHPMHL LGIFSTFNTS VLKDVTLYKG AFPARYGGRL
SSVVDISTKD GNMYKHHGEF SVGLLSTQLT LEGPLKKGKT SYVLSGRRSY PDLIASPFVK
SSEEDLQKFS LFFYDLNAKI HHQFSEKDKL YLSFYMGKDK LRIRDRYSDD SEGPTDNYDL
SDLNIQWGNI TGTLRWTHIV SPKLFTNTML IGSSYKFSTG IHTEDKYDAD ASSNTLKLNS
GIRDYGVKTD IDYRPMPAHA IKMGASYMHR RFTPGIIRMK QTEGDDTILD SVNNNRNIPA
SEMDLYAEDD WEITSRLKLN AGLHWSGFSV QDHFYHSLQP RVSMRFLLPG DWGLKASYTH
MTQYIHLLAN NSISLPTDLW VPATRKVAPQ QADQFALGLA RNLFRNRYEF SAEVYYKKMR
EVAEYKDGAE YLTTSKGDTW QDQIASGTGR SYGLEVLLQK KTGRLTGWLG YTWAISDRNI
PGVNYGHTFY YKYDRRHDFH LVTIYKLRKN IELSGSWTYQ SASPFTVPVA RYEGTIGPVT
PNDPNNWSPT VDYINNRNNV RITAYHRLDL GVNFIKEKKN GNVRTWNISV LNAYNRMNPF
FYYVKDYSDN KAKVNLNGLV LLPLTPSFSY SLKF
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