Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4279 |
Symbol | |
ID | 8360452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5342614 |
End bp | 5343099 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644966441 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003123929 |
Protein GI | 256423276 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0560787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATTT CATTAAATTG TATATGCACA AATAAGATGG CTACAAAAGA TCAGGTATTC TCTTATATAG AGCCAGAGGA AAACAGCGGA TACTTGCTTT GGCAAGTGAC AATGCAATGG CAGCTAAGTA TGAACAGAGC ACTCGGAAAA ATGGAGCTCA CGCTAACGCA ATTCTCCTTA ATGGCGGGTC TCTACTGGTT GAGTGAAAAA AAAGGGGCAG TTACCCAGCA GCAGTTGGCC GATTACGCTA ATACCGATAA AATGATGACT TCTAAAGTAT TAGCGGTATT AGAGAAAAAA CAAATCGTAG AAAGGGTGAA AGACCCCGGT GATAGCCGTG CGAAACAATT AAAAATAACC GATAAAGGTG TGGAGATATT GAGGGAGGCG TATCGGATTG TTAAACAGGT GGATGATGTG TTTTTTAAAA ACGTGGTGAA AGATAAAATA GTATTCGATG ATTTACTTGT GAGATTAATA AAGTAG
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Protein sequence | MFISLNCICT NKMATKDQVF SYIEPEENSG YLLWQVTMQW QLSMNRALGK MELTLTQFSL MAGLYWLSEK KGAVTQQQLA DYANTDKMMT SKVLAVLEKK QIVERVKDPG DSRAKQLKIT DKGVEILREA YRIVKQVDDV FFKNVVKDKI VFDDLLVRLI K
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